Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2517 and Dsui_2518 are separated by 119 nucleotides Dsui_2518 and Dsui_2519 are separated by 45 nucleotides Dsui_2519 and Dsui_2520 are separated by 700 nucleotides
Dsui_2517: Dsui_2517 - transposase, at 2,667,970 to 2,668,926
_2517
Dsui_2518: Dsui_2518 - hypothetical protein, at 2,669,046 to 2,669,519
_2518
Dsui_2519: Dsui_2519 - methyl-accepting chemotaxis protein, at 2,669,565 to 2,671,214
_2519
Dsui_2520: Dsui_2520 - flagellar basal-body rod protein FlgF, at 2,671,915 to 2,672,661
_2520
Position (kb)
2669
2670
2671
2672 Strain fitness (log2 ratio)
-2
-1
0
1 at 2669.130 kb on + strand, within Dsui_2518 at 2669.156 kb on + strand, within Dsui_2518 at 2669.220 kb on - strand, within Dsui_2518 at 2669.234 kb on - strand, within Dsui_2518 at 2669.258 kb on + strand at 2669.386 kb on - strand, within Dsui_2518 at 2669.403 kb on + strand, within Dsui_2518 at 2669.692 kb on - strand at 2669.806 kb on + strand at 2669.893 kb on + strand, within Dsui_2519 at 2669.901 kb on - strand, within Dsui_2519 at 2670.126 kb on - strand, within Dsui_2519 at 2670.222 kb on - strand, within Dsui_2519 at 2670.254 kb on - strand, within Dsui_2519 at 2670.306 kb on + strand, within Dsui_2519 at 2670.400 kb on - strand, within Dsui_2519 at 2670.442 kb on - strand, within Dsui_2519 at 2670.451 kb on - strand, within Dsui_2519 at 2670.490 kb on + strand at 2670.508 kb on - strand, within Dsui_2519 at 2670.711 kb on - strand, within Dsui_2519 at 2670.726 kb on - strand, within Dsui_2519 at 2670.726 kb on - strand, within Dsui_2519 at 2670.732 kb on - strand, within Dsui_2519 at 2670.805 kb on - strand, within Dsui_2519 at 2671.242 kb on - strand at 2671.242 kb on - strand at 2671.267 kb on + strand at 2671.353 kb on + strand at 2671.353 kb on + strand at 2671.361 kb on - strand at 2671.387 kb on - strand at 2671.387 kb on - strand at 2671.387 kb on - strand at 2671.475 kb on + strand at 2671.480 kb on + strand at 2671.518 kb on - strand at 2671.523 kb on - strand at 2671.551 kb on - strand at 2671.551 kb on - strand at 2671.558 kb on - strand at 2671.621 kb on - strand at 2671.621 kb on - strand at 2671.926 kb on + strand at 2671.986 kb on + strand at 2671.989 kb on - strand at 2672.054 kb on + strand, within Dsui_2520 at 2672.094 kb on - strand, within Dsui_2520 at 2672.127 kb on + strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.131 kb on - strand, within Dsui_2520 at 2672.133 kb on - strand at 2672.133 kb on - strand at 2672.152 kb on - strand, within Dsui_2520 at 2672.172 kb on - strand, within Dsui_2520 at 2672.172 kb on - strand, within Dsui_2520
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 2,669,130 + Dsui_2518 0.18 -0.2 2,669,156 + Dsui_2518 0.23 -0.8 2,669,220 - Dsui_2518 0.37 -0.8 2,669,234 - Dsui_2518 0.40 -1.8 2,669,258 + +0.8 2,669,386 - Dsui_2518 0.72 -0.2 2,669,403 + Dsui_2518 0.75 -1.2 2,669,692 - +0.1 2,669,806 + +0.8 2,669,893 + Dsui_2519 0.20 -0.2 2,669,901 - Dsui_2519 0.20 +0.8 2,670,126 - Dsui_2519 0.34 +0.8 2,670,222 - Dsui_2519 0.40 -0.8 2,670,254 - Dsui_2519 0.42 -1.2 2,670,306 + Dsui_2519 0.45 -0.2 2,670,400 - Dsui_2519 0.51 +0.8 2,670,442 - Dsui_2519 0.53 -1.2 2,670,451 - Dsui_2519 0.54 +0.8 2,670,490 + +0.8 2,670,508 - Dsui_2519 0.57 -0.2 2,670,711 - Dsui_2519 0.69 -1.2 2,670,726 - Dsui_2519 0.70 -2.0 2,670,726 - Dsui_2519 0.70 -0.0 2,670,732 - Dsui_2519 0.71 -0.2 2,670,805 - Dsui_2519 0.75 -1.2 2,671,242 - -1.5 2,671,242 - +0.8 2,671,267 + +0.8 2,671,353 + -0.8 2,671,353 + +0.8 2,671,361 - +0.8 2,671,387 - -0.2 2,671,387 - +0.8 2,671,387 - -0.8 2,671,475 + +0.8 2,671,480 + +0.8 2,671,518 - +0.8 2,671,523 - -1.8 2,671,551 - -0.2 2,671,551 - +0.8 2,671,558 - -1.5 2,671,621 - -1.5 2,671,621 - -0.2 2,671,926 + -2.0 2,671,986 + -0.8 2,671,989 - -0.8 2,672,054 + Dsui_2520 0.19 -0.2 2,672,094 - Dsui_2520 0.24 -0.8 2,672,127 + Dsui_2520 0.28 -0.2 2,672,131 - Dsui_2520 0.29 -2.0 2,672,131 - Dsui_2520 0.29 -1.2 2,672,131 - Dsui_2520 0.29 +0.8 2,672,131 - Dsui_2520 0.29 +0.8 2,672,131 - Dsui_2520 0.29 -0.2 2,672,131 - Dsui_2520 0.29 -2.2 2,672,133 - +0.8 2,672,133 - +0.8 2,672,152 - Dsui_2520 0.32 -2.2 2,672,172 - Dsui_2520 0.34 -0.8 2,672,172 - Dsui_2520 0.34 +0.8
Or see this region's nucleotide sequence