Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2491 and Dsui_2492 overlap by 4 nucleotides Dsui_2492 and Dsui_2493 are separated by 195 nucleotides Dsui_2493 and Dsui_2494 are separated by 71 nucleotides
Dsui_2491: Dsui_2491 - transposase, TnpA family, at 2,639,903 to 2,642,932
_2491
Dsui_2492: Dsui_2492 - site-specific recombinase, DNA invertase Pin, at 2,642,929 to 2,643,537
_2492
Dsui_2493: Dsui_2493 - Hg(II)-responsive transcriptional regulator, at 2,643,733 to 2,644,167
_2493
Dsui_2494: Dsui_2494 - MerT mercuric transport protein, at 2,644,239 to 2,644,589
_2494
Position (kb)
2642
2643
2644 Strain fitness (log2 ratio)
-2
-1
0
1 at 2641.931 kb on - strand, within Dsui_2491 at 2641.950 kb on + strand at 2642.064 kb on - strand, within Dsui_2491 at 2642.081 kb on - strand, within Dsui_2491 at 2642.109 kb on - strand, within Dsui_2491 at 2642.122 kb on + strand, within Dsui_2491 at 2642.130 kb on - strand, within Dsui_2491 at 2642.131 kb on - strand, within Dsui_2491 at 2642.133 kb on + strand, within Dsui_2491 at 2642.144 kb on + strand, within Dsui_2491 at 2642.298 kb on - strand, within Dsui_2491 at 2642.305 kb on + strand, within Dsui_2491 at 2642.647 kb on + strand at 2642.680 kb on + strand at 2642.726 kb on - strand at 2642.772 kb on + strand at 2642.785 kb on + strand at 2642.793 kb on - strand at 2642.892 kb on + strand at 2642.900 kb on - strand at 2643.011 kb on - strand, within Dsui_2492 at 2643.011 kb on - strand, within Dsui_2492 at 2643.179 kb on + strand at 2643.182 kb on - strand, within Dsui_2492 at 2643.224 kb on - strand, within Dsui_2492 at 2643.373 kb on + strand, within Dsui_2492 at 2643.381 kb on - strand, within Dsui_2492 at 2643.463 kb on + strand, within Dsui_2492 at 2643.525 kb on + strand at 2643.533 kb on + strand at 2643.533 kb on + strand at 2643.554 kb on + strand at 2643.563 kb on - strand at 2643.730 kb on + strand at 2643.733 kb on - strand at 2643.738 kb on - strand at 2643.834 kb on - strand, within Dsui_2493 at 2643.845 kb on + strand, within Dsui_2493 at 2643.845 kb on + strand, within Dsui_2493 at 2643.884 kb on + strand, within Dsui_2493 at 2643.892 kb on - strand, within Dsui_2493 at 2643.910 kb on + strand, within Dsui_2493 at 2643.963 kb on + strand at 2643.970 kb on + strand, within Dsui_2493 at 2643.971 kb on - strand, within Dsui_2493 at 2644.060 kb on - strand, within Dsui_2493 at 2644.084 kb on - strand, within Dsui_2493 at 2644.098 kb on - strand, within Dsui_2493 at 2644.210 kb on + strand at 2644.269 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 2,641,931 - Dsui_2491 0.67 -0.3 2,641,950 + +0.8 2,642,064 - Dsui_2491 0.71 -2.2 2,642,081 - Dsui_2491 0.72 +0.8 2,642,109 - Dsui_2491 0.73 -1.2 2,642,122 + Dsui_2491 0.73 -0.2 2,642,130 - Dsui_2491 0.73 -0.2 2,642,131 - Dsui_2491 0.74 +0.8 2,642,133 + Dsui_2491 0.74 -0.8 2,642,144 + Dsui_2491 0.74 -0.2 2,642,298 - Dsui_2491 0.79 +0.8 2,642,305 + Dsui_2491 0.79 -0.8 2,642,647 + +0.8 2,642,680 + +0.8 2,642,726 - +0.8 2,642,772 + -0.2 2,642,785 + -0.2 2,642,793 - +0.2 2,642,892 + -1.5 2,642,900 - -0.2 2,643,011 - Dsui_2492 0.13 -0.8 2,643,011 - Dsui_2492 0.13 -0.8 2,643,179 + +0.8 2,643,182 - Dsui_2492 0.42 -1.7 2,643,224 - Dsui_2492 0.48 -2.0 2,643,373 + Dsui_2492 0.73 +0.8 2,643,381 - Dsui_2492 0.74 +0.8 2,643,463 + Dsui_2492 0.88 +0.8 2,643,525 + -0.2 2,643,533 + +0.8 2,643,533 + -0.2 2,643,554 + +0.8 2,643,563 - -0.2 2,643,730 + -0.5 2,643,733 - +0.8 2,643,738 - +0.8 2,643,834 - Dsui_2493 0.23 +0.1 2,643,845 + Dsui_2493 0.26 -0.9 2,643,845 + Dsui_2493 0.26 +0.7 2,643,884 + Dsui_2493 0.35 -0.1 2,643,892 - Dsui_2493 0.37 +0.1 2,643,910 + Dsui_2493 0.41 -0.2 2,643,963 + -0.2 2,643,970 + Dsui_2493 0.54 -1.2 2,643,971 - Dsui_2493 0.55 -0.6 2,644,060 - Dsui_2493 0.75 -0.6 2,644,084 - Dsui_2493 0.81 +0.3 2,644,098 - Dsui_2493 0.84 -0.5 2,644,210 + -0.2 2,644,269 + +0.8
Or see this region's nucleotide sequence