Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2433 and Dsui_2434 are separated by 143 nucleotides Dsui_2434 and Dsui_2435 overlap by 4 nucleotides Dsui_2435 and Dsui_2436 are separated by 88 nucleotides
Dsui_2433: Dsui_2433 - aspartate/tyrosine/aromatic aminotransferase, at 2,591,940 to 2,593,148
_2433
Dsui_2434: Dsui_2434 - excinuclease ABC, B subunit, at 2,593,292 to 2,595,364
_2434
Dsui_2435: Dsui_2435 - protein-tyrosine-phosphatase, at 2,595,361 to 2,595,888
_2435
Dsui_2436: Dsui_2436 - ribonuclease, Rne/Rng family, at 2,595,977 to 2,598,739
_2436
Position (kb)
2593
2594
2595
2596 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 2592.307 kb on + strand, within Dsui_2433 at 2592.321 kb on - strand, within Dsui_2433 at 2592.375 kb on - strand, within Dsui_2433 at 2592.434 kb on - strand, within Dsui_2433 at 2592.442 kb on + strand, within Dsui_2433 at 2592.478 kb on - strand, within Dsui_2433 at 2592.548 kb on - strand, within Dsui_2433 at 2592.762 kb on + strand, within Dsui_2433 at 2592.781 kb on + strand, within Dsui_2433 at 2592.834 kb on - strand, within Dsui_2433 at 2592.915 kb on - strand, within Dsui_2433 at 2592.915 kb on - strand, within Dsui_2433 at 2592.915 kb on - strand, within Dsui_2433 at 2592.919 kb on + strand, within Dsui_2433 at 2592.961 kb on + strand, within Dsui_2433 at 2593.054 kb on - strand at 2593.054 kb on - strand at 2593.054 kb on - strand at 2593.060 kb on - strand at 2593.154 kb on + strand at 2593.189 kb on + strand at 2593.440 kb on + strand at 2593.474 kb on + strand at 2593.555 kb on + strand, within Dsui_2434 at 2593.555 kb on + strand, within Dsui_2434 at 2593.555 kb on + strand, within Dsui_2434 at 2593.600 kb on + strand, within Dsui_2434 at 2593.611 kb on + strand, within Dsui_2434 at 2593.624 kb on + strand, within Dsui_2434 at 2593.638 kb on - strand, within Dsui_2434 at 2593.650 kb on + strand, within Dsui_2434 at 2593.650 kb on + strand, within Dsui_2434 at 2593.658 kb on - strand, within Dsui_2434 at 2593.719 kb on + strand, within Dsui_2434 at 2593.765 kb on + strand, within Dsui_2434 at 2593.947 kb on + strand, within Dsui_2434 at 2593.995 kb on + strand, within Dsui_2434 at 2594.007 kb on - strand, within Dsui_2434 at 2594.009 kb on + strand, within Dsui_2434 at 2594.145 kb on + strand, within Dsui_2434 at 2594.303 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.389 kb on + strand, within Dsui_2434 at 2594.397 kb on - strand at 2594.397 kb on - strand at 2594.445 kb on + strand, within Dsui_2434 at 2594.535 kb on + strand, within Dsui_2434 at 2594.580 kb on + strand, within Dsui_2434 at 2594.612 kb on + strand, within Dsui_2434 at 2594.627 kb on + strand, within Dsui_2434 at 2594.667 kb on + strand, within Dsui_2434 at 2594.686 kb on + strand, within Dsui_2434 at 2594.711 kb on + strand, within Dsui_2434 at 2594.711 kb on + strand, within Dsui_2434 at 2594.753 kb on - strand, within Dsui_2434 at 2594.767 kb on + strand, within Dsui_2434 at 2594.798 kb on - strand, within Dsui_2434 at 2594.799 kb on - strand, within Dsui_2434 at 2594.861 kb on + strand, within Dsui_2434 at 2594.861 kb on + strand, within Dsui_2434 at 2594.871 kb on + strand, within Dsui_2434 at 2595.157 kb on + strand at 2595.161 kb on + strand at 2595.225 kb on - strand at 2595.260 kb on + strand at 2595.266 kb on + strand at 2595.312 kb on + strand at 2595.351 kb on + strand at 2595.361 kb on - strand at 2595.363 kb on + strand at 2595.388 kb on + strand at 2595.396 kb on - strand at 2595.518 kb on + strand, within Dsui_2435 at 2595.556 kb on - strand, within Dsui_2435 at 2595.556 kb on - strand, within Dsui_2435 at 2595.620 kb on + strand, within Dsui_2435 at 2595.680 kb on + strand, within Dsui_2435 at 2595.680 kb on + strand, within Dsui_2435 at 2595.748 kb on - strand, within Dsui_2435 at 2595.769 kb on + strand, within Dsui_2435 at 2595.779 kb on + strand, within Dsui_2435 at 2595.859 kb on + strand at 2595.865 kb on + strand at 2595.882 kb on + strand at 2595.936 kb on + strand at 2595.944 kb on + strand at 2595.968 kb on + strand at 2596.027 kb on - strand at 2596.074 kb on + strand at 2596.098 kb on - strand at 2596.162 kb on - strand at 2596.206 kb on - strand at 2596.234 kb on - strand at 2596.253 kb on - strand at 2596.271 kb on - strand, within Dsui_2436
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 2,592,307 + Dsui_2433 0.30 -0.7 2,592,321 - Dsui_2433 0.32 -1.9 2,592,375 - Dsui_2433 0.36 -0.7 2,592,434 - Dsui_2433 0.41 -1.7 2,592,442 + Dsui_2433 0.42 +0.9 2,592,478 - Dsui_2433 0.44 -2.9 2,592,548 - Dsui_2433 0.50 -2.3 2,592,762 + Dsui_2433 0.68 +0.9 2,592,781 + Dsui_2433 0.70 -0.7 2,592,834 - Dsui_2433 0.74 -2.1 2,592,915 - Dsui_2433 0.81 -1.9 2,592,915 - Dsui_2433 0.81 -2.3 2,592,915 - Dsui_2433 0.81 -2.7 2,592,919 + Dsui_2433 0.81 +0.9 2,592,961 + Dsui_2433 0.84 -0.1 2,593,054 - -3.2 2,593,054 - -0.0 2,593,054 - -1.8 2,593,060 - -1.3 2,593,154 + +0.9 2,593,189 + -0.1 2,593,440 + -0.1 2,593,474 + -2.4 2,593,555 + Dsui_2434 0.13 -1.8 2,593,555 + Dsui_2434 0.13 -1.1 2,593,555 + Dsui_2434 0.13 -2.6 2,593,600 + Dsui_2434 0.15 -0.1 2,593,611 + Dsui_2434 0.15 -1.1 2,593,624 + Dsui_2434 0.16 +0.9 2,593,638 - Dsui_2434 0.17 -1.9 2,593,650 + Dsui_2434 0.17 -0.1 2,593,650 + Dsui_2434 0.17 -0.7 2,593,658 - Dsui_2434 0.18 -0.7 2,593,719 + Dsui_2434 0.21 -1.1 2,593,765 + Dsui_2434 0.23 +0.9 2,593,947 + Dsui_2434 0.32 -1.9 2,593,995 + Dsui_2434 0.34 -0.7 2,594,007 - Dsui_2434 0.34 -1.4 2,594,009 + Dsui_2434 0.35 -2.7 2,594,145 + Dsui_2434 0.41 -4.3 2,594,303 + Dsui_2434 0.49 -4.1 2,594,389 + Dsui_2434 0.53 -3.6 2,594,389 + Dsui_2434 0.53 -4.2 2,594,389 + Dsui_2434 0.53 -4.1 2,594,389 + Dsui_2434 0.53 -1.7 2,594,389 + Dsui_2434 0.53 -4.0 2,594,389 + Dsui_2434 0.53 -2.3 2,594,397 - +0.9 2,594,397 - +0.9 2,594,445 + Dsui_2434 0.56 -2.6 2,594,535 + Dsui_2434 0.60 -3.6 2,594,580 + Dsui_2434 0.62 -0.1 2,594,612 + Dsui_2434 0.64 -3.5 2,594,627 + Dsui_2434 0.64 -1.7 2,594,667 + Dsui_2434 0.66 -1.4 2,594,686 + Dsui_2434 0.67 -5.0 2,594,711 + Dsui_2434 0.68 -1.1 2,594,711 + Dsui_2434 0.68 -1.7 2,594,753 - Dsui_2434 0.70 -0.7 2,594,767 + Dsui_2434 0.71 -3.0 2,594,798 - Dsui_2434 0.73 -1.1 2,594,799 - Dsui_2434 0.73 -1.1 2,594,861 + Dsui_2434 0.76 -3.5 2,594,861 + Dsui_2434 0.76 -1.9 2,594,871 + Dsui_2434 0.76 -3.4 2,595,157 + -4.8 2,595,161 + -4.6 2,595,225 - -0.1 2,595,260 + -5.2 2,595,266 + -3.9 2,595,312 + -2.2 2,595,351 + +0.0 2,595,361 - -0.1 2,595,363 + -0.1 2,595,388 + -0.0 2,595,396 - +0.9 2,595,518 + Dsui_2435 0.30 -0.9 2,595,556 - Dsui_2435 0.37 -0.1 2,595,556 - Dsui_2435 0.37 -1.1 2,595,620 + Dsui_2435 0.49 -0.1 2,595,680 + Dsui_2435 0.60 -0.5 2,595,680 + Dsui_2435 0.60 -0.3 2,595,748 - Dsui_2435 0.73 -1.1 2,595,769 + Dsui_2435 0.77 +0.1 2,595,779 + Dsui_2435 0.79 -0.3 2,595,859 + +0.0 2,595,865 + +0.6 2,595,882 + +0.6 2,595,936 + -1.4 2,595,944 + -0.2 2,595,968 + -0.1 2,596,027 - -0.3 2,596,074 + -0.7 2,596,098 - +0.4 2,596,162 - +0.4 2,596,206 - -0.1 2,596,234 - -0.2 2,596,253 - +0.6 2,596,271 - Dsui_2436 0.11 -0.1
Or see this region's nucleotide sequence