Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2327 and Dsui_2328 are separated by 76 nucleotides Dsui_2328 and Dsui_2329 are separated by 57 nucleotides Dsui_2329 and Dsui_2330 are separated by 131 nucleotides
Dsui_2327: Dsui_2327 - putative toxin-antitoxin system toxin component, PIN family, at 2,480,825 to 2,481,295
_2327
Dsui_2328: Dsui_2328 - hypothetical protein, at 2,481,372 to 2,482,229
_2328
Dsui_2329: Dsui_2329 - putative dehydrogenase, at 2,482,287 to 2,483,414
_2329
Dsui_2330: Dsui_2330 - 3-hydroxyacyl-CoA dehydrogenase, at 2,483,546 to 2,484,394
_2330
Position (kb)
2482
2483
2484 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2481.447 kb on - strand at 2481.515 kb on + strand at 2481.534 kb on - strand at 2481.642 kb on + strand at 2481.783 kb on - strand at 2482.061 kb on - strand at 2482.312 kb on - strand at 2482.368 kb on - strand at 2482.405 kb on - strand, within Dsui_2329 at 2482.405 kb on - strand, within Dsui_2329 at 2482.472 kb on - strand at 2482.475 kb on + strand at 2482.628 kb on + strand at 2482.671 kb on + strand at 2482.679 kb on - strand at 2482.795 kb on - strand, within Dsui_2329 at 2482.822 kb on + strand at 2482.971 kb on + strand at 2482.990 kb on + strand at 2483.082 kb on - strand at 2483.176 kb on - strand, within Dsui_2329 at 2483.196 kb on - strand, within Dsui_2329 at 2483.196 kb on - strand at 2483.196 kb on - strand, within Dsui_2329 at 2483.198 kb on + strand at 2483.475 kb on - strand at 2483.559 kb on - strand at 2483.630 kb on - strand at 2483.641 kb on - strand at 2483.691 kb on + strand, within Dsui_2330 at 2483.755 kb on + strand, within Dsui_2330 at 2483.780 kb on + strand, within Dsui_2330 at 2483.788 kb on - strand at 2483.788 kb on - strand, within Dsui_2330 at 2483.986 kb on - strand at 2484.055 kb on + strand at 2484.129 kb on - strand, within Dsui_2330 at 2484.228 kb on + strand, within Dsui_2330 at 2484.376 kb on + strand at 2484.387 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 2,481,447 - +1.0 2,481,515 + +1.0 2,481,534 - -0.0 2,481,642 + -0.0 2,481,783 - -1.4 2,482,061 - +1.0 2,482,312 - -0.0 2,482,368 - +1.0 2,482,405 - Dsui_2329 0.10 -0.0 2,482,405 - Dsui_2329 0.10 -2.2 2,482,472 - +1.0 2,482,475 + -0.6 2,482,628 + -0.6 2,482,671 + +1.0 2,482,679 - +1.0 2,482,795 - Dsui_2329 0.45 -2.0 2,482,822 + +1.0 2,482,971 + -0.0 2,482,990 + -0.0 2,483,082 - -1.0 2,483,176 - Dsui_2329 0.79 -1.4 2,483,196 - Dsui_2329 0.81 -0.0 2,483,196 - +1.0 2,483,196 - Dsui_2329 0.81 +1.0 2,483,198 + -0.0 2,483,475 - +1.0 2,483,559 - -0.0 2,483,630 - -0.0 2,483,641 - +1.0 2,483,691 + Dsui_2330 0.17 -0.0 2,483,755 + Dsui_2330 0.25 -0.6 2,483,780 + Dsui_2330 0.28 -1.8 2,483,788 - -0.0 2,483,788 - Dsui_2330 0.29 -0.0 2,483,986 - +1.0 2,484,055 + +2.0 2,484,129 - Dsui_2330 0.69 -1.0 2,484,228 + Dsui_2330 0.80 -1.4 2,484,376 + +1.0 2,484,387 - +1.0
Or see this region's nucleotide sequence