Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2319 and Dsui_2320 are separated by 164 nucleotides Dsui_2320 and Dsui_2321 are separated by 52 nucleotides
Dsui_2319: Dsui_2319 - transcriptional regulator, at 2,473,716 to 2,474,675
_2319
Dsui_2320: Dsui_2320 - Protein of unknown function (DUF2863), at 2,474,840 to 2,476,018
_2320
Dsui_2321: Dsui_2321 - site-specific recombinase, at 2,476,071 to 2,478,146
_2321
Position (kb)
2474
2475
2476
2477 Strain fitness (log2 ratio)
-2
-1
0
1 at 2473.894 kb on + strand, within Dsui_2319 at 2473.894 kb on + strand, within Dsui_2319 at 2473.900 kb on + strand, within Dsui_2319 at 2473.939 kb on - strand at 2473.975 kb on - strand, within Dsui_2319 at 2474.018 kb on - strand, within Dsui_2319 at 2474.052 kb on - strand, within Dsui_2319 at 2474.113 kb on - strand at 2474.113 kb on - strand, within Dsui_2319 at 2474.207 kb on + strand, within Dsui_2319 at 2474.287 kb on + strand, within Dsui_2319 at 2474.296 kb on + strand, within Dsui_2319 at 2474.310 kb on - strand, within Dsui_2319 at 2474.355 kb on + strand, within Dsui_2319 at 2474.380 kb on + strand, within Dsui_2319 at 2474.411 kb on - strand, within Dsui_2319 at 2474.424 kb on + strand, within Dsui_2319 at 2474.432 kb on - strand, within Dsui_2319 at 2474.467 kb on + strand, within Dsui_2319 at 2474.501 kb on - strand at 2474.511 kb on + strand, within Dsui_2319 at 2474.613 kb on + strand at 2474.752 kb on - strand at 2474.767 kb on + strand at 2474.788 kb on - strand at 2474.969 kb on - strand, within Dsui_2320 at 2475.103 kb on - strand, within Dsui_2320 at 2475.220 kb on + strand, within Dsui_2320 at 2475.376 kb on + strand, within Dsui_2320 at 2475.532 kb on + strand at 2475.598 kb on + strand at 2475.631 kb on + strand, within Dsui_2320 at 2475.698 kb on + strand at 2475.734 kb on + strand, within Dsui_2320 at 2475.830 kb on + strand at 2475.911 kb on - strand at 2475.981 kb on - strand at 2475.981 kb on - strand at 2476.020 kb on + strand at 2476.020 kb on + strand at 2476.028 kb on - strand at 2476.038 kb on - strand at 2476.051 kb on - strand at 2476.134 kb on + strand at 2476.344 kb on - strand, within Dsui_2321 at 2476.763 kb on - strand, within Dsui_2321 at 2476.937 kb on - strand, within Dsui_2321 at 2476.985 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 2,473,894 + Dsui_2319 0.19 -0.2 2,473,894 + Dsui_2319 0.19 +0.1 2,473,900 + Dsui_2319 0.19 +0.2 2,473,939 - +0.9 2,473,975 - Dsui_2319 0.27 -0.6 2,474,018 - Dsui_2319 0.31 +0.9 2,474,052 - Dsui_2319 0.35 -0.6 2,474,113 - +0.9 2,474,113 - Dsui_2319 0.41 -1.1 2,474,207 + Dsui_2319 0.51 -0.4 2,474,287 + Dsui_2319 0.59 -0.2 2,474,296 + Dsui_2319 0.60 +0.2 2,474,310 - Dsui_2319 0.62 +0.9 2,474,355 + Dsui_2319 0.67 +0.0 2,474,380 + Dsui_2319 0.69 -0.6 2,474,411 - Dsui_2319 0.72 -1.4 2,474,424 + Dsui_2319 0.74 +0.1 2,474,432 - Dsui_2319 0.75 -1.1 2,474,467 + Dsui_2319 0.78 -0.4 2,474,501 - +0.9 2,474,511 + Dsui_2319 0.83 -0.2 2,474,613 + -0.1 2,474,752 - -1.4 2,474,767 + +0.9 2,474,788 - -1.2 2,474,969 - Dsui_2320 0.11 +0.2 2,475,103 - Dsui_2320 0.22 +0.2 2,475,220 + Dsui_2320 0.32 +0.9 2,475,376 + Dsui_2320 0.45 -0.6 2,475,532 + +0.9 2,475,598 + -0.1 2,475,631 + Dsui_2320 0.67 -0.1 2,475,698 + +0.9 2,475,734 + Dsui_2320 0.76 -0.1 2,475,830 + +0.9 2,475,911 - -0.1 2,475,981 - +0.4 2,475,981 - -0.6 2,476,020 + -0.1 2,476,020 + -0.1 2,476,028 - -0.2 2,476,038 - -0.2 2,476,051 - -0.3 2,476,134 + -0.1 2,476,344 - Dsui_2321 0.13 -1.4 2,476,763 - Dsui_2321 0.33 +0.9 2,476,937 - Dsui_2321 0.42 -1.9 2,476,985 + +0.9
Or see this region's nucleotide sequence