Strain Fitness in Dechlorosoma suillum PS around Dsui_2290
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,444,007 | - | Dsui_2289 | 0.38 | +1.0 | |
2,444,055 | - | Dsui_2289 | 0.41 | -1.0 | |
2,444,059 | - | +1.0 | |||
2,444,122 | + | Dsui_2289 | 0.46 | -0.0 | |
2,444,122 | + | +1.0 | |||
2,444,233 | - | Dsui_2289 | 0.53 | +1.0 | |
2,444,233 | - | Dsui_2289 | 0.53 | +1.0 | |
2,444,233 | - | Dsui_2289 | 0.53 | -1.0 | |
2,444,255 | + | -0.0 | |||
2,444,836 | + | -0.0 | |||
2,444,875 | - | +1.0 | |||
2,444,914 | - | +1.0 | |||
2,445,119 | - | Dsui_2290 | 0.23 | -1.3 | |
2,445,148 | - | Dsui_2290 | 0.27 | -0.6 | |
2,445,166 | - | Dsui_2290 | 0.30 | -2.3 | |
2,445,189 | + | +1.0 | |||
2,445,197 | - | Dsui_2290 | 0.34 | -0.0 | |
2,445,221 | + | -0.0 | |||
2,445,287 | - | Dsui_2290 | 0.48 | -0.6 | |
2,445,323 | - | Dsui_2290 | 0.53 | -0.6 | |
2,445,356 | - | -0.0 | |||
2,445,829 | - | Dsui_2291 | 0.31 | +1.0 | |
2,445,923 | - | Dsui_2291 | 0.46 | -0.0 | |
2,445,975 | + | -0.0 | |||
2,446,076 | + | +1.0 | |||
2,446,077 | - | +1.0 | |||
2,446,094 | + | Dsui_2291 | 0.73 | +1.0 | |
2,446,158 | - | Dsui_2291 | 0.83 | +1.0 | |
2,446,158 | - | Dsui_2291 | 0.83 | -0.0 | |
2,446,158 | - | +1.0 | |||
2,446,296 | - | -1.3 | |||
2,446,518 | + | +1.0 | |||
2,446,584 | - | -0.6 |
Or see this region's nucleotide sequence