Strain Fitness in Dechlorosoma suillum PS around Dsui_2239
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
2,382,327 | + | Dsui_2238 | 0.74 | -1.3 | |
2,382,382 | + | +1.0 | |||
2,382,412 | + | Dsui_2238 | 0.79 | -0.0 | |
2,382,527 | - | +1.0 | |||
2,382,531 | - | Dsui_2238 | 0.87 | -1.0 | |
2,382,562 | + | +1.0 | |||
2,382,782 | - | -0.0 | |||
2,382,936 | + | +0.0 | |||
2,383,038 | - | +0.0 | |||
2,383,038 | - | -1.0 | |||
2,383,038 | - | +1.0 | |||
2,383,157 | - | +1.0 | |||
2,383,221 | - | -0.7 | |||
2,383,350 | - | Dsui_2239 | 0.14 | +0.1 | |
2,383,356 | - | Dsui_2239 | 0.14 | -0.2 | |
2,383,373 | - | Dsui_2239 | 0.16 | +0.7 | |
2,383,475 | + | +1.0 | |||
2,383,483 | - | Dsui_2239 | 0.26 | -1.9 | |
2,383,483 | - | Dsui_2239 | 0.26 | -1.0 | |
2,383,483 | - | Dsui_2239 | 0.26 | -0.3 | |
2,383,515 | + | +1.0 | |||
2,383,523 | - | Dsui_2239 | 0.30 | -0.7 | |
2,383,788 | - | Dsui_2239 | 0.54 | -0.8 | |
2,383,801 | + | +0.0 | |||
2,383,977 | + | +1.0 | |||
2,384,133 | + | +0.0 | |||
2,384,365 | + | +1.0 | |||
2,384,447 | + | +0.0 | |||
2,384,525 | + | +1.0 | |||
2,384,532 | - | -1.0 | |||
2,384,533 | - | +0.0 | |||
2,384,561 | + | +0.0 | |||
2,384,637 | - | +0.0 | |||
2,384,701 | + | +1.0 | |||
2,384,775 | + | +1.0 | |||
2,385,067 | - | -0.6 | |||
2,385,240 | - | +1.0 | |||
2,385,263 | + | -0.6 | |||
2,385,277 | + | +0.0 |
Or see this region's nucleotide sequence