Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1631 and Dsui_1632 are separated by 18 nucleotides Dsui_1632 and Dsui_1633 are separated by 17 nucleotides Dsui_1633 and Dsui_1634 are separated by 69 nucleotides Dsui_1634 and Dsui_1635 are separated by 117 nucleotides
Dsui_1631: Dsui_1631 - cytochrome c oxidase accessory protein FixG, at 1,714,313 to 1,715,725
_1631
Dsui_1632: Dsui_1632 - hypothetical protein, at 1,715,744 to 1,716,268
_1632
Dsui_1633: Dsui_1633 - Protein of unknown function (DUF3149), at 1,716,286 to 1,716,420
_1633
Dsui_1634: Dsui_1634 - universal stress protein UspA-like protein, at 1,716,490 to 1,716,933
_1634
Dsui_1635: Dsui_1635 - putative exonuclease of the beta-lactamase fold involved in RNA processing, at 1,717,051 to 1,718,475
_1635
Position (kb)
1716
1717 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 1715.597 kb on + strand at 1715.639 kb on - strand at 1715.709 kb on + strand at 1716.228 kb on + strand at 1716.228 kb on + strand at 1716.236 kb on - strand at 1716.276 kb on + strand at 1716.282 kb on + strand at 1716.282 kb on + strand at 1716.290 kb on - strand at 1716.344 kb on + strand, within Dsui_1633 at 1716.344 kb on + strand, within Dsui_1633 at 1716.354 kb on + strand, within Dsui_1633 at 1716.371 kb on + strand, within Dsui_1633 at 1716.422 kb on - strand at 1716.489 kb on - strand at 1716.489 kb on - strand at 1716.501 kb on - strand at 1716.507 kb on - strand at 1716.513 kb on + strand at 1716.523 kb on + strand at 1716.531 kb on - strand at 1716.531 kb on - strand at 1716.531 kb on - strand at 1716.531 kb on - strand at 1716.531 kb on - strand at 1716.540 kb on - strand, within Dsui_1634 at 1716.683 kb on + strand, within Dsui_1634 at 1716.683 kb on + strand, within Dsui_1634 at 1716.683 kb on + strand, within Dsui_1634 at 1716.683 kb on + strand, within Dsui_1634 at 1716.905 kb on + strand at 1716.908 kb on + strand at 1716.913 kb on - strand at 1716.931 kb on + strand at 1716.931 kb on + strand at 1716.986 kb on - strand at 1716.994 kb on + strand at 1717.011 kb on + strand at 1717.035 kb on + strand at 1717.057 kb on + strand at 1717.172 kb on - strand at 1717.211 kb on + strand, within Dsui_1635 at 1717.211 kb on + strand, within Dsui_1635 at 1717.319 kb on - strand, within Dsui_1635 at 1717.356 kb on + strand, within Dsui_1635 at 1717.645 kb on - strand, within Dsui_1635 at 1717.706 kb on - strand, within Dsui_1635 at 1717.764 kb on + strand, within Dsui_1635 at 1717.792 kb on - strand, within Dsui_1635
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 1,715,597 + +0.0 1,715,639 - -0.4 1,715,709 + +0.5 1,716,228 + +0.5 1,716,228 + -0.8 1,716,236 - -2.2 1,716,276 + -0.5 1,716,282 + -0.4 1,716,282 + -0.3 1,716,290 - -1.9 1,716,344 + Dsui_1633 0.43 -1.0 1,716,344 + Dsui_1633 0.43 -0.4 1,716,354 + Dsui_1633 0.50 +0.2 1,716,371 + Dsui_1633 0.63 -0.5 1,716,422 - -0.9 1,716,489 - -0.6 1,716,489 - -0.4 1,716,501 - -0.2 1,716,507 - +0.5 1,716,513 + +0.2 1,716,523 + -0.4 1,716,531 - +0.1 1,716,531 - +0.4 1,716,531 - -0.6 1,716,531 - -0.4 1,716,531 - -0.0 1,716,540 - Dsui_1634 0.11 +0.2 1,716,683 + Dsui_1634 0.43 -0.4 1,716,683 + Dsui_1634 0.43 -0.4 1,716,683 + Dsui_1634 0.43 -1.9 1,716,683 + Dsui_1634 0.43 -2.9 1,716,905 + +0.1 1,716,908 + -2.5 1,716,913 - -0.8 1,716,931 + -0.9 1,716,931 + -1.4 1,716,986 - -0.4 1,716,994 + -0.4 1,717,011 + -0.4 1,717,035 + +0.6 1,717,057 + +0.6 1,717,172 - +0.6 1,717,211 + Dsui_1635 0.11 -1.4 1,717,211 + Dsui_1635 0.11 -0.4 1,717,319 - Dsui_1635 0.19 +0.7 1,717,356 + Dsui_1635 0.21 -0.3 1,717,645 - Dsui_1635 0.42 -1.3 1,717,706 - Dsui_1635 0.46 +0.7 1,717,764 + Dsui_1635 0.50 -0.3 1,717,792 - Dsui_1635 0.52 -2.2
Or see this region's nucleotide sequence