Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1608 and Dsui_1609 are separated by 49 nucleotides Dsui_1609 and Dsui_1610 are separated by 129 nucleotides
Dsui_1608: Dsui_1608 - hypothetical protein, at 1,692,396 to 1,692,704
_1608
Dsui_1609: Dsui_1609 - Thiopurine S-methyltransferase (TPMT), at 1,692,754 to 1,693,371
_1609
Dsui_1610: Dsui_1610 - Protein of unknown function (DUF3079), at 1,693,501 to 1,693,725
_1610
Position (kb)
1693
1694 Strain fitness (log2 ratio)
-2
-1
0
1 at 1692.519 kb on - strand at 1692.589 kb on + strand at 1692.658 kb on + strand at 1692.668 kb on + strand at 1692.758 kb on + strand at 1692.849 kb on - strand, within Dsui_1609 at 1692.929 kb on + strand, within Dsui_1609 at 1692.956 kb on + strand, within Dsui_1609 at 1692.985 kb on + strand, within Dsui_1609 at 1692.985 kb on + strand, within Dsui_1609 at 1693.373 kb on - strand at 1693.422 kb on + strand at 1693.526 kb on - strand at 1693.541 kb on - strand at 1693.541 kb on - strand, within Dsui_1610 at 1693.610 kb on + strand, within Dsui_1610 at 1693.638 kb on + strand, within Dsui_1610 at 1693.643 kb on + strand, within Dsui_1610 at 1693.643 kb on + strand, within Dsui_1610 at 1694.018 kb on - strand at 1694.071 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.087 kb on + strand at 1694.095 kb on - strand at 1694.095 kb on - strand at 1694.131 kb on + strand at 1694.171 kb on + strand at 1694.189 kb on + strand at 1694.189 kb on + strand at 1694.189 kb on + strand at 1694.197 kb on - strand at 1694.207 kb on - strand at 1694.218 kb on + strand at 1694.234 kb on - strand at 1694.253 kb on + strand at 1694.261 kb on + strand at 1694.268 kb on + strand at 1694.295 kb on + strand at 1694.303 kb on - strand at 1694.305 kb on + strand at 1694.308 kb on - strand at 1694.308 kb on - strand at 1694.318 kb on - strand at 1694.350 kb on + strand at 1694.350 kb on + strand at 1694.350 kb on + strand at 1694.350 kb on + strand at 1694.358 kb on - strand at 1694.358 kb on - strand at 1694.418 kb on - strand at 1694.420 kb on + strand at 1694.454 kb on - strand at 1694.454 kb on - strand at 1694.462 kb on - strand at 1694.469 kb on + strand at 1694.479 kb on - strand at 1694.496 kb on - strand at 1694.501 kb on - strand at 1694.586 kb on + strand at 1694.586 kb on + strand at 1694.587 kb on - strand at 1694.593 kb on - strand at 1694.594 kb on - strand at 1694.594 kb on - strand at 1694.640 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 1,692,519 - +0.6 1,692,589 + -0.4 1,692,658 + +0.6 1,692,668 + +0.6 1,692,758 + -0.4 1,692,849 - Dsui_1609 0.15 -1.4 1,692,929 + Dsui_1609 0.28 -0.4 1,692,956 + Dsui_1609 0.33 +0.6 1,692,985 + Dsui_1609 0.37 +0.6 1,692,985 + Dsui_1609 0.37 +1.6 1,693,373 - -0.9 1,693,422 + +0.7 1,693,526 - -0.3 1,693,541 - +0.7 1,693,541 - Dsui_1610 0.18 -1.9 1,693,610 + Dsui_1610 0.48 -1.7 1,693,638 + Dsui_1610 0.61 -0.3 1,693,643 + Dsui_1610 0.63 +0.7 1,693,643 + Dsui_1610 0.63 -1.3 1,694,018 - +0.7 1,694,071 + -2.3 1,694,087 + +0.7 1,694,087 + -0.3 1,694,087 + -1.3 1,694,087 + -0.9 1,694,087 + -1.3 1,694,087 + +0.7 1,694,087 + +0.7 1,694,087 + -2.3 1,694,087 + +0.7 1,694,087 + -0.3 1,694,087 + -1.3 1,694,095 - -1.3 1,694,095 - -1.7 1,694,131 + -0.3 1,694,171 + -0.9 1,694,189 + -0.3 1,694,189 + +0.7 1,694,189 + -1.3 1,694,197 - -1.3 1,694,207 - -0.3 1,694,218 + -0.3 1,694,234 - -0.3 1,694,253 + -0.3 1,694,261 + +0.7 1,694,268 + +0.7 1,694,295 + -0.9 1,694,303 - -0.9 1,694,305 + -0.9 1,694,308 - -2.3 1,694,308 - +0.7 1,694,318 - -1.7 1,694,350 + -1.3 1,694,350 + -0.3 1,694,350 + -1.3 1,694,350 + -0.3 1,694,358 - +0.7 1,694,358 - -0.9 1,694,418 - +0.7 1,694,420 + +0.7 1,694,454 - +0.7 1,694,454 - -0.9 1,694,462 - -0.3 1,694,469 + +0.7 1,694,479 - -0.3 1,694,496 - +0.7 1,694,501 - -0.3 1,694,586 + -0.3 1,694,586 + -1.3 1,694,587 - -0.3 1,694,593 - -0.7 1,694,594 - +0.7 1,694,594 - -0.9 1,694,640 + -0.3
Or see this region's nucleotide sequence