Strain Fitness in Dechlorosoma suillum PS around Dsui_1603
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,684,246 | + | +0.6 | |||
1,684,262 | + | +0.6 | |||
1,685,258 | + | Dsui_1603 | 0.44 | -1.0 | |
1,685,273 | + | Dsui_1603 | 0.45 | -1.7 | |
1,685,363 | + | +0.6 | |||
1,686,108 | + | Dsui_1603 | 0.75 | +0.6 | |
1,686,175 | + | -0.4 | |||
1,686,404 | + | Dsui_1603 | 0.85 | +0.6 | |
1,686,686 | + | +0.6 | |||
1,686,885 | - | +0.6 | |||
1,686,900 | + | -0.4 | |||
1,686,905 | + | -0.4 | |||
1,686,905 | + | +0.3 | |||
1,687,038 | + | +0.5 | |||
1,687,046 | - | -1.0 | |||
1,687,126 | + | -0.0 | |||
1,687,158 | - | -1.7 | |||
1,687,183 | - | Dsui_1604 | 0.14 | -1.0 | |
1,687,195 | + | Dsui_1604 | 0.16 | -0.7 | |
1,687,204 | - | Dsui_1604 | 0.17 | -2.4 | |
1,687,247 | + | Dsui_1604 | 0.24 | +0.6 | |
1,687,268 | + | Dsui_1604 | 0.27 | +1.6 | |
1,687,338 | - | Dsui_1604 | 0.38 | -1.7 | |
1,687,340 | + | Dsui_1604 | 0.39 | -1.0 | |
1,687,348 | - | -0.4 | |||
1,687,356 | + | Dsui_1604 | 0.41 | -2.2 | |
1,687,375 | + | Dsui_1604 | 0.44 | -1.4 | |
1,687,416 | - | Dsui_1604 | 0.51 | +0.6 | |
1,687,557 | - | Dsui_1604 | 0.73 | +0.6 | |
1,687,577 | + | Dsui_1604 | 0.76 | -2.7 | |
1,687,610 | - | Dsui_1604 | 0.81 | -1.0 | |
1,687,667 | - | +0.6 |
Or see this region's nucleotide sequence