Strain Fitness in Dechlorosoma suillum PS around Dsui_1556
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,621,903 | - | Dsui_1555 | 0.71 | -0.7 | |
1,621,905 | + | Dsui_1555 | 0.71 | +0.7 | |
1,622,093 | + | Dsui_1555 | 0.77 | -0.9 | |
1,622,093 | + | Dsui_1555 | 0.77 | -0.9 | |
1,622,101 | - | Dsui_1555 | 0.78 | -0.7 | |
1,622,101 | - | Dsui_1555 | 0.78 | +0.9 | |
1,622,474 | - | Dsui_1555 | 0.90 | -0.6 | |
1,622,584 | + | -0.6 | |||
1,622,696 | - | -1.2 | |||
1,622,735 | - | +0.8 | |||
1,622,759 | - | +0.7 | |||
1,623,043 | - | Dsui_1556 | 0.21 | -1.0 | |
1,623,171 | + | Dsui_1556 | 0.31 | -0.3 | |
1,623,171 | + | Dsui_1556 | 0.31 | -2.3 | |
1,623,348 | + | +0.7 | |||
1,623,507 | + | Dsui_1556 | 0.60 | +0.7 | |
1,623,551 | - | Dsui_1556 | 0.63 | -0.4 | |
1,623,605 | + | Dsui_1556 | 0.68 | -0.9 | |
1,623,611 | + | Dsui_1556 | 0.68 | -0.3 | |
1,623,652 | - | Dsui_1556 | 0.72 | +0.3 | |
1,623,679 | - | Dsui_1556 | 0.74 | -0.3 | |
1,623,709 | + | Dsui_1556 | 0.76 | -2.8 | |
1,624,103 | + | -0.3 |
Or see this region's nucleotide sequence