Strain Fitness in Dechlorosoma suillum PS around Dsui_1316
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,375,453 | - | -0.5 | |||
1,375,480 | - | Dsui_1316 | 0.12 | -2.2 | |
1,375,481 | - | Dsui_1316 | 0.12 | -1.9 | |
1,375,678 | - | Dsui_1316 | 0.43 | -1.8 | |
1,375,720 | - | Dsui_1316 | 0.49 | -3.1 | |
1,375,956 | - | Dsui_1316 | 0.86 | -3.2 | |
1,376,156 | - | Dsui_1317 | 0.48 | -2.9 | |
1,376,339 | + | +0.6 | |||
1,376,339 | + | -0.4 | |||
1,376,339 | + | -2.2 | |||
1,376,339 | + | -2.4 | |||
1,376,339 | + | +0.6 | |||
1,376,339 | + | -2.0 | |||
1,376,347 | - | +0.1 | |||
1,376,347 | - | -1.1 | |||
1,376,347 | - | +0.1 | |||
1,376,347 | - | -1.0 | |||
1,376,347 | - | +0.2 | |||
1,376,349 | + | +0.6 | |||
1,376,401 | - | -1.4 | |||
1,376,421 | - | -0.4 | |||
1,376,432 | + | -1.7 | |||
1,376,437 | + | -2.0 | |||
1,376,537 | + | Dsui_1318 | 0.17 | -0.4 | |
1,376,549 | - | Dsui_1318 | 0.18 | -0.8 | |
1,376,564 | + | Dsui_1318 | 0.20 | +0.6 | |
1,376,571 | - | Dsui_1318 | 0.21 | +0.2 | |
1,376,637 | - | Dsui_1318 | 0.28 | -0.5 | |
1,376,682 | + | Dsui_1318 | 0.34 | -0.4 | |
1,376,720 | - | Dsui_1318 | 0.38 | -1.7 | |
1,376,770 | - | Dsui_1318 | 0.44 | -2.2 | |
1,376,780 | - | Dsui_1318 | 0.45 | -1.4 | |
1,376,840 | - | Dsui_1318 | 0.52 | +0.4 | |
1,376,905 | + | Dsui_1318 | 0.60 | -1.0 | |
1,376,992 | + | Dsui_1318 | 0.70 | -1.0 |
Or see this region's nucleotide sequence