Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1268 and Dsui_1269 are separated by 124 nucleotides Dsui_1269 and Dsui_1270 are separated by 33 nucleotides Dsui_1270 and Dsui_1271 are separated by 10 nucleotides
Dsui_1268: Dsui_1268 - dinucleotide-utilizing enzyme possibly involved in molybdopterin or thiamin biosynthesis, at 1,331,621 to 1,332,370
_1268
Dsui_1269: Dsui_1269 - hypothetical protein, at 1,332,495 to 1,332,917
_1269
Dsui_1270: Dsui_1270 - C-terminal processing peptidase, at 1,332,951 to 1,334,354
_1270
Dsui_1271: Dsui_1271 - membrane-bound metallopeptidase, at 1,334,365 to 1,335,825
_1271
Position (kb)
1332
1333
1334
1335 Strain fitness (log2 ratio)
-4
-3
-2
-1
0
1 at 1332.478 kb on - strand at 1332.573 kb on - strand, within Dsui_1269 at 1332.605 kb on + strand, within Dsui_1269 at 1332.620 kb on + strand, within Dsui_1269 at 1332.629 kb on + strand, within Dsui_1269 at 1332.647 kb on - strand, within Dsui_1269 at 1332.653 kb on + strand at 1332.716 kb on + strand, within Dsui_1269 at 1332.748 kb on - strand, within Dsui_1269 at 1332.949 kb on + strand at 1332.987 kb on - strand at 1334.319 kb on - strand at 1334.389 kb on - strand at 1334.450 kb on + strand at 1334.492 kb on - strand at 1334.605 kb on + strand, within Dsui_1271 at 1334.612 kb on - strand, within Dsui_1271 at 1334.716 kb on + strand, within Dsui_1271 at 1334.784 kb on + strand, within Dsui_1271 at 1334.909 kb on - strand, within Dsui_1271 at 1334.994 kb on - strand, within Dsui_1271 at 1335.014 kb on - strand, within Dsui_1271 at 1335.126 kb on + strand, within Dsui_1271 at 1335.223 kb on - strand, within Dsui_1271 at 1335.263 kb on + strand, within Dsui_1271 at 1335.322 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 1,332,478 - +0.2 1,332,573 - Dsui_1269 0.18 -0.5 1,332,605 + Dsui_1269 0.26 +1.6 1,332,620 + Dsui_1269 0.30 -2.4 1,332,629 + Dsui_1269 0.32 -0.4 1,332,647 - Dsui_1269 0.36 -0.7 1,332,653 + +0.6 1,332,716 + Dsui_1269 0.52 -0.8 1,332,748 - Dsui_1269 0.60 -0.6 1,332,949 + -3.4 1,332,987 - -0.0 1,334,319 - -4.1 1,334,389 - -1.5 1,334,450 + -0.5 1,334,492 - -2.3 1,334,605 + Dsui_1271 0.16 +0.5 1,334,612 - Dsui_1271 0.17 -1.3 1,334,716 + Dsui_1271 0.24 -1.5 1,334,784 + Dsui_1271 0.29 -0.5 1,334,909 - Dsui_1271 0.37 -1.0 1,334,994 - Dsui_1271 0.43 -2.1 1,335,014 - Dsui_1271 0.44 -1.8 1,335,126 + Dsui_1271 0.52 +0.5 1,335,223 - Dsui_1271 0.59 -1.2 1,335,263 + Dsui_1271 0.61 -1.8 1,335,322 + +0.5
Or see this region's nucleotide sequence