Strain Fitness in Dechlorosoma suillum PS around Dsui_1249
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
1,311,425 | + | Dsui_1248 | 0.77 | -0.9 | |
1,311,972 | + | -1.0 | |||
1,311,979 | + | -1.4 | |||
1,312,001 | - | -1.0 | |||
1,312,020 | + | -2.3 | |||
1,312,056 | + | Dsui_1249 | 0.22 | -2.0 | |
1,312,135 | + | Dsui_1249 | 0.51 | -2.7 | |
1,312,187 | - | Dsui_1249 | 0.70 | +0.6 | |
1,312,192 | + | Dsui_1249 | 0.72 | -2.4 | |
1,312,200 | - | Dsui_1249 | 0.75 | -1.0 | |
1,312,224 | + | Dsui_1249 | 0.84 | -1.3 | |
1,312,513 | + | Dsui_1250 | 0.15 | -0.1 | |
1,312,594 | + | Dsui_1250 | 0.20 | -1.3 | |
1,312,594 | + | Dsui_1250 | 0.20 | -0.4 | |
1,312,602 | - | Dsui_1250 | 0.20 | -0.4 | |
1,312,602 | - | +0.6 | |||
1,312,612 | + | Dsui_1250 | 0.21 | +0.1 | |
1,312,798 | - | Dsui_1250 | 0.32 | +0.6 | |
1,312,808 | - | Dsui_1250 | 0.33 | +0.6 | |
1,312,861 | - | Dsui_1250 | 0.36 | -0.6 | |
1,312,865 | - | Dsui_1250 | 0.36 | -0.1 | |
1,313,009 | + | Dsui_1250 | 0.45 | +2.2 | |
1,313,017 | - | Dsui_1250 | 0.45 | -1.0 | |
1,313,063 | - | Dsui_1250 | 0.48 | +0.6 | |
1,313,165 | + | Dsui_1250 | 0.54 | -0.9 | |
1,313,213 | + | Dsui_1250 | 0.57 | -0.3 | |
1,313,221 | - | Dsui_1250 | 0.57 | -1.0 | |
1,313,265 | - | Dsui_1250 | 0.60 | -1.4 | |
1,313,266 | - | Dsui_1250 | 0.60 | -3.0 |
Or see this region's nucleotide sequence