Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1227 and Dsui_1228 are separated by 147 nucleotides Dsui_1228 and Dsui_1229 are separated by 94 nucleotides
Dsui_1227: Dsui_1227 - DNA/RNA helicase, superfamily I, at 1,283,019 to 1,285,226
_1227
Dsui_1228: Dsui_1228 - response regulator containing a CheY-like receiver domain and an HD-GYP domain, at 1,285,374 to 1,286,645
_1228
Dsui_1229: Dsui_1229 - Zn-dependent oxidoreductase, NADPH:quinone reductase, at 1,286,740 to 1,287,714
_1229
Position (kb)
1285
1286
1287 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2 at 1284.615 kb on - strand at 1284.732 kb on + strand, within Dsui_1227 at 1284.750 kb on + strand, within Dsui_1227 at 1284.885 kb on + strand, within Dsui_1227 at 1284.987 kb on + strand, within Dsui_1227 at 1285.179 kb on + strand at 1285.239 kb on - strand at 1285.264 kb on - strand at 1285.574 kb on - strand, within Dsui_1228 at 1285.577 kb on + strand, within Dsui_1228 at 1285.596 kb on + strand, within Dsui_1228 at 1285.614 kb on + strand, within Dsui_1228 at 1285.707 kb on - strand, within Dsui_1228 at 1286.095 kb on + strand, within Dsui_1228 at 1286.246 kb on + strand, within Dsui_1228 at 1286.264 kb on - strand, within Dsui_1228 at 1286.269 kb on - strand, within Dsui_1228 at 1286.307 kb on - strand, within Dsui_1228 at 1286.376 kb on - strand, within Dsui_1228 at 1286.489 kb on - strand, within Dsui_1228 at 1286.524 kb on - strand at 1286.563 kb on - strand at 1286.604 kb on - strand at 1286.624 kb on - strand at 1286.662 kb on - strand at 1286.697 kb on + strand at 1286.721 kb on + strand at 1286.790 kb on - strand at 1286.792 kb on + strand at 1286.889 kb on + strand, within Dsui_1229 at 1286.949 kb on - strand, within Dsui_1229 at 1287.266 kb on + strand, within Dsui_1229 at 1287.269 kb on - strand, within Dsui_1229 at 1287.354 kb on + strand, within Dsui_1229 at 1287.417 kb on - strand, within Dsui_1229 at 1287.419 kb on + strand, within Dsui_1229 at 1287.466 kb on - strand, within Dsui_1229 at 1287.477 kb on + strand, within Dsui_1229 at 1287.546 kb on - strand, within Dsui_1229 at 1287.583 kb on - strand at 1287.645 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 1,284,615 - -1.0 1,284,732 + Dsui_1227 0.78 -3.6 1,284,750 + Dsui_1227 0.78 -2.4 1,284,885 + Dsui_1227 0.85 -3.7 1,284,987 + Dsui_1227 0.89 -2.2 1,285,179 + -2.1 1,285,239 - +0.6 1,285,264 - -0.4 1,285,574 - Dsui_1228 0.16 -2.8 1,285,577 + Dsui_1228 0.16 -1.0 1,285,596 + Dsui_1228 0.17 -1.0 1,285,614 + Dsui_1228 0.19 -0.7 1,285,707 - Dsui_1228 0.26 -0.6 1,286,095 + Dsui_1228 0.57 +0.6 1,286,246 + Dsui_1228 0.69 -1.7 1,286,264 - Dsui_1228 0.70 -1.2 1,286,269 - Dsui_1228 0.70 -1.0 1,286,307 - Dsui_1228 0.73 -1.1 1,286,376 - Dsui_1228 0.79 -2.0 1,286,489 - Dsui_1228 0.88 -0.2 1,286,524 - -0.4 1,286,563 - -1.3 1,286,604 - +1.9 1,286,624 - -0.4 1,286,662 - -0.4 1,286,697 + -0.4 1,286,721 + -1.7 1,286,790 - -2.0 1,286,792 + -0.0 1,286,889 + Dsui_1229 0.15 +0.4 1,286,949 - Dsui_1229 0.21 -0.4 1,287,266 + Dsui_1229 0.54 -0.8 1,287,269 - Dsui_1229 0.54 +0.6 1,287,354 + Dsui_1229 0.63 -0.3 1,287,417 - Dsui_1229 0.69 -1.0 1,287,419 + Dsui_1229 0.70 +0.3 1,287,466 - Dsui_1229 0.74 -1.4 1,287,477 + Dsui_1229 0.76 -0.4 1,287,546 - Dsui_1229 0.83 -0.4 1,287,583 - +0.6 1,287,645 - -1.7
Or see this region's nucleotide sequence