Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_1076 and Dsui_1077 are separated by 104 nucleotides Dsui_1077 and Dsui_1078 are separated by 742 nucleotides
Dsui_1076: Dsui_1076 - copper/silver-translocating P-type ATPase, at 1,111,333 to 1,113,615
_1076
Dsui_1077: Dsui_1077 - hypothetical protein, at 1,113,720 to 1,113,974
_1077
Dsui_1078: Dsui_1078 - Protein of unknown function (DUF2933), at 1,114,717 to 1,114,983
_1078
Position (kb)
1113
1114 Strain fitness (log2 ratio)
-3
-2
-1
0
1
2
3 at 1112.721 kb on + strand, within Dsui_1076 at 1112.770 kb on - strand, within Dsui_1076 at 1112.770 kb on - strand, within Dsui_1076 at 1112.812 kb on + strand, within Dsui_1076 at 1112.825 kb on + strand, within Dsui_1076 at 1112.905 kb on + strand, within Dsui_1076 at 1112.923 kb on - strand, within Dsui_1076 at 1112.928 kb on - strand, within Dsui_1076 at 1112.939 kb on + strand, within Dsui_1076 at 1112.947 kb on - strand, within Dsui_1076 at 1112.947 kb on - strand, within Dsui_1076 at 1112.952 kb on + strand, within Dsui_1076 at 1112.960 kb on - strand, within Dsui_1076 at 1112.985 kb on + strand, within Dsui_1076 at 1113.076 kb on - strand, within Dsui_1076 at 1113.278 kb on + strand, within Dsui_1076 at 1113.288 kb on + strand, within Dsui_1076 at 1113.288 kb on + strand, within Dsui_1076 at 1113.288 kb on + strand, within Dsui_1076 at 1113.288 kb on + strand, within Dsui_1076 at 1113.291 kb on - strand, within Dsui_1076 at 1113.301 kb on - strand, within Dsui_1076 at 1113.307 kb on - strand, within Dsui_1076 at 1113.323 kb on + strand, within Dsui_1076 at 1113.327 kb on + strand, within Dsui_1076 at 1113.327 kb on + strand, within Dsui_1076 at 1113.331 kb on - strand, within Dsui_1076 at 1113.351 kb on + strand, within Dsui_1076 at 1113.359 kb on - strand, within Dsui_1076 at 1113.380 kb on + strand, within Dsui_1076 at 1113.388 kb on - strand at 1113.399 kb on + strand at 1113.407 kb on - strand at 1113.407 kb on - strand at 1113.434 kb on + strand at 1113.453 kb on + strand at 1113.460 kb on + strand at 1113.461 kb on - strand at 1113.467 kb on - strand at 1113.467 kb on - strand at 1113.505 kb on + strand at 1113.546 kb on + strand at 1113.554 kb on - strand at 1113.575 kb on + strand at 1113.575 kb on - strand at 1113.575 kb on - strand at 1113.583 kb on - strand at 1113.659 kb on + strand at 1113.752 kb on + strand, within Dsui_1077 at 1113.798 kb on + strand, within Dsui_1077 at 1113.800 kb on - strand, within Dsui_1077 at 1113.834 kb on + strand, within Dsui_1077 at 1113.863 kb on + strand, within Dsui_1077 at 1113.871 kb on - strand, within Dsui_1077 at 1113.905 kb on + strand, within Dsui_1077 at 1113.918 kb on - strand, within Dsui_1077 at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.983 kb on + strand at 1113.993 kb on + strand at 1114.048 kb on + strand at 1114.048 kb on + strand at 1114.062 kb on + strand at 1114.079 kb on + strand at 1114.132 kb on - strand at 1114.132 kb on - strand at 1114.132 kb on - strand at 1114.132 kb on - strand at 1114.135 kb on + strand at 1114.148 kb on - strand at 1114.164 kb on + strand at 1114.164 kb on + strand at 1114.187 kb on + strand at 1114.187 kb on + strand at 1114.195 kb on - strand at 1114.231 kb on + strand at 1114.263 kb on - strand at 1114.287 kb on + strand at 1114.287 kb on - strand at 1114.314 kb on + strand at 1114.314 kb on + strand at 1114.328 kb on - strand at 1114.375 kb on + strand at 1114.419 kb on - strand at 1114.424 kb on + strand at 1114.461 kb on + strand at 1114.461 kb on + strand at 1114.464 kb on - strand at 1114.469 kb on - strand at 1114.474 kb on - strand at 1114.484 kb on + strand at 1114.492 kb on - strand at 1114.502 kb on + strand at 1114.502 kb on + strand at 1114.505 kb on - strand at 1114.510 kb on - strand at 1114.512 kb on + strand at 1114.520 kb on - strand at 1114.520 kb on - strand at 1114.520 kb on - strand at 1114.520 kb on - strand at 1114.521 kb on - strand at 1114.522 kb on + strand at 1114.523 kb on + strand at 1114.523 kb on + strand at 1114.523 kb on + strand at 1114.523 kb on + strand at 1114.531 kb on - strand at 1114.541 kb on - strand at 1114.542 kb on + strand at 1114.552 kb on - strand at 1114.562 kb on - strand at 1114.567 kb on - strand at 1114.569 kb on + strand at 1114.569 kb on + strand at 1114.577 kb on - strand at 1114.590 kb on + strand at 1114.593 kb on - strand at 1114.600 kb on + strand at 1114.600 kb on + strand at 1114.600 kb on + strand at 1114.600 kb on + strand at 1114.608 kb on - strand at 1114.608 kb on - strand at 1114.610 kb on + strand at 1114.612 kb on + strand at 1114.613 kb on - strand at 1114.620 kb on + strand at 1114.620 kb on - strand at 1114.661 kb on + strand at 1114.678 kb on + strand at 1114.678 kb on + strand at 1114.678 kb on + strand at 1114.678 kb on + strand at 1114.686 kb on - strand at 1114.700 kb on + strand at 1114.700 kb on + strand at 1114.708 kb on - strand at 1114.733 kb on + strand at 1114.737 kb on - strand at 1114.740 kb on + strand at 1114.740 kb on + strand at 1114.740 kb on + strand at 1114.740 kb on + strand at 1114.743 kb on + strand at 1114.745 kb on + strand, within Dsui_1078 at 1114.746 kb on - strand, within Dsui_1078 at 1114.746 kb on - strand, within Dsui_1078 at 1114.748 kb on + strand, within Dsui_1078 at 1114.750 kb on + strand, within Dsui_1078 at 1114.751 kb on - strand, within Dsui_1078 at 1114.754 kb on - strand, within Dsui_1078 at 1114.789 kb on - strand, within Dsui_1078 at 1114.807 kb on + strand, within Dsui_1078 at 1114.807 kb on + strand, within Dsui_1078 at 1114.815 kb on - strand, within Dsui_1078 at 1114.822 kb on - strand, within Dsui_1078 at 1114.824 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.831 kb on + strand, within Dsui_1078 at 1114.839 kb on - strand, within Dsui_1078 at 1114.839 kb on - strand, within Dsui_1078 at 1114.852 kb on + strand, within Dsui_1078 at 1114.857 kb on + strand, within Dsui_1078 at 1114.858 kb on - strand, within Dsui_1078 at 1114.860 kb on - strand, within Dsui_1078 at 1114.865 kb on - strand, within Dsui_1078 at 1114.865 kb on - strand, within Dsui_1078 at 1114.869 kb on + strand, within Dsui_1078 at 1114.875 kb on + strand, within Dsui_1078 at 1114.877 kb on - strand, within Dsui_1078 at 1114.880 kb on + strand, within Dsui_1078 at 1114.883 kb on + strand, within Dsui_1078 at 1114.883 kb on + strand, within Dsui_1078 at 1114.883 kb on - strand, within Dsui_1078 at 1114.909 kb on + strand, within Dsui_1078 at 1114.910 kb on - strand, within Dsui_1078 at 1114.916 kb on - strand, within Dsui_1078 at 1114.917 kb on - strand, within Dsui_1078 at 1114.921 kb on + strand, within Dsui_1078 at 1114.921 kb on + strand, within Dsui_1078 at 1114.922 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.927 kb on + strand, within Dsui_1078 at 1114.929 kb on + strand, within Dsui_1078 at 1114.929 kb on - strand, within Dsui_1078 at 1114.932 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.935 kb on - strand, within Dsui_1078 at 1114.942 kb on + strand, within Dsui_1078 at 1114.942 kb on - strand, within Dsui_1078 at 1114.950 kb on - strand, within Dsui_1078 at 1114.957 kb on + strand at 1114.957 kb on + strand at 1114.957 kb on + strand at 1114.957 kb on + strand at 1114.965 kb on + strand at 1114.970 kb on + strand at 1114.973 kb on - strand at 1114.973 kb on - strand at 1114.973 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 1,112,721 + Dsui_1076 0.61 +0.4 1,112,770 - Dsui_1076 0.63 -1.7 1,112,770 - Dsui_1076 0.63 -2.7 1,112,812 + Dsui_1076 0.65 -0.7 1,112,825 + Dsui_1076 0.65 -1.7 1,112,905 + Dsui_1076 0.69 -0.9 1,112,923 - Dsui_1076 0.70 +0.6 1,112,928 - Dsui_1076 0.70 +0.6 1,112,939 + Dsui_1076 0.70 -0.4 1,112,947 - Dsui_1076 0.71 +0.6 1,112,947 - Dsui_1076 0.71 -0.4 1,112,952 + Dsui_1076 0.71 -0.7 1,112,960 - Dsui_1076 0.71 -1.7 1,112,985 + Dsui_1076 0.72 +0.3 1,113,076 - Dsui_1076 0.76 +0.6 1,113,278 + Dsui_1076 0.85 -0.4 1,113,288 + Dsui_1076 0.86 -1.2 1,113,288 + Dsui_1076 0.86 +0.2 1,113,288 + Dsui_1076 0.86 -1.1 1,113,288 + Dsui_1076 0.86 +0.3 1,113,291 - Dsui_1076 0.86 -2.2 1,113,301 - Dsui_1076 0.86 -2.5 1,113,307 - Dsui_1076 0.86 -1.4 1,113,323 + Dsui_1076 0.87 -2.8 1,113,327 + Dsui_1076 0.87 -0.9 1,113,327 + Dsui_1076 0.87 -0.6 1,113,331 - Dsui_1076 0.88 +0.8 1,113,351 + Dsui_1076 0.88 -2.2 1,113,359 - Dsui_1076 0.89 -0.4 1,113,380 + Dsui_1076 0.90 +1.6 1,113,388 - +0.6 1,113,399 + -0.1 1,113,407 - +0.6 1,113,407 - +0.6 1,113,434 + -0.1 1,113,453 + +0.6 1,113,460 + +0.1 1,113,461 - -1.7 1,113,467 - +0.6 1,113,467 - -2.2 1,113,505 + -0.3 1,113,546 + +0.6 1,113,554 - +0.6 1,113,575 + -0.9 1,113,575 - -1.9 1,113,575 - -0.4 1,113,583 - -0.4 1,113,659 + -1.7 1,113,752 + Dsui_1077 0.13 -1.9 1,113,798 + Dsui_1077 0.31 -1.2 1,113,800 - Dsui_1077 0.31 -0.9 1,113,834 + Dsui_1077 0.45 -1.4 1,113,863 + Dsui_1077 0.56 -2.1 1,113,871 - Dsui_1077 0.59 +0.6 1,113,905 + Dsui_1077 0.73 +3.7 1,113,918 - Dsui_1077 0.78 +0.6 1,113,983 + -0.4 1,113,983 + -0.9 1,113,983 + -0.1 1,113,983 + -0.5 1,113,983 + +1.1 1,113,983 + -0.9 1,113,993 + -0.8 1,114,048 + -0.6 1,114,048 + -0.1 1,114,062 + -0.4 1,114,079 + -1.7 1,114,132 - +0.6 1,114,132 - +0.6 1,114,132 - +0.6 1,114,132 - -0.4 1,114,135 + +0.6 1,114,148 - +0.6 1,114,164 + -0.6 1,114,164 + -0.2 1,114,187 + -0.5 1,114,187 + +0.6 1,114,195 - +0.6 1,114,231 + -1.9 1,114,263 - +0.6 1,114,287 + -0.9 1,114,287 - +0.6 1,114,314 + -0.0 1,114,314 + -0.1 1,114,328 - +0.6 1,114,375 + +0.6 1,114,419 - +0.6 1,114,424 + -1.9 1,114,461 + -0.5 1,114,461 + -1.7 1,114,464 - +0.6 1,114,469 - +0.6 1,114,474 - +0.6 1,114,484 + -0.9 1,114,492 - -0.9 1,114,502 + +0.6 1,114,502 + +0.6 1,114,505 - -1.4 1,114,510 - +0.6 1,114,512 + -1.4 1,114,520 - +0.6 1,114,520 - +0.6 1,114,520 - +0.6 1,114,520 - +0.6 1,114,521 - +0.6 1,114,522 + -0.4 1,114,523 + +0.1 1,114,523 + -1.2 1,114,523 + -1.7 1,114,523 + -0.4 1,114,531 - -0.7 1,114,541 - +0.6 1,114,542 + -0.4 1,114,552 - -2.2 1,114,562 - +0.6 1,114,567 - -0.4 1,114,569 + +0.1 1,114,569 + -0.4 1,114,577 - -0.9 1,114,590 + -0.4 1,114,593 - +0.6 1,114,600 + +0.6 1,114,600 + -3.0 1,114,600 + +0.6 1,114,600 + -2.7 1,114,608 - +0.6 1,114,608 - +0.6 1,114,610 + +1.2 1,114,612 + -1.4 1,114,613 - +0.6 1,114,620 + -1.5 1,114,620 - +0.6 1,114,661 + +0.6 1,114,678 + +0.6 1,114,678 + -0.4 1,114,678 + -0.4 1,114,678 + -0.4 1,114,686 - -0.4 1,114,700 + +1.1 1,114,700 + -0.9 1,114,708 - -0.4 1,114,733 + -0.9 1,114,737 - +0.6 1,114,740 + -1.2 1,114,740 + +0.6 1,114,740 + -0.9 1,114,740 + -0.4 1,114,743 + -1.4 1,114,745 + Dsui_1078 0.10 -0.4 1,114,746 - Dsui_1078 0.11 +0.6 1,114,746 - Dsui_1078 0.11 -0.4 1,114,748 + Dsui_1078 0.12 -3.3 1,114,750 + Dsui_1078 0.12 +0.6 1,114,751 - Dsui_1078 0.13 +0.6 1,114,754 - Dsui_1078 0.14 -1.7 1,114,789 - Dsui_1078 0.27 +0.6 1,114,807 + Dsui_1078 0.34 -2.5 1,114,807 + Dsui_1078 0.34 -0.9 1,114,815 - Dsui_1078 0.37 -1.4 1,114,822 - Dsui_1078 0.39 +0.6 1,114,824 + Dsui_1078 0.40 -1.7 1,114,831 + Dsui_1078 0.43 -0.9 1,114,831 + Dsui_1078 0.43 -0.7 1,114,831 + Dsui_1078 0.43 -1.7 1,114,831 + Dsui_1078 0.43 +0.6 1,114,831 + Dsui_1078 0.43 -0.4 1,114,839 - Dsui_1078 0.46 -0.4 1,114,839 - Dsui_1078 0.46 -1.4 1,114,852 + Dsui_1078 0.51 -2.7 1,114,857 + Dsui_1078 0.52 -0.4 1,114,858 - Dsui_1078 0.53 -0.4 1,114,860 - Dsui_1078 0.54 -1.7 1,114,865 - Dsui_1078 0.55 +0.6 1,114,865 - Dsui_1078 0.55 +0.6 1,114,869 + Dsui_1078 0.57 +0.6 1,114,875 + Dsui_1078 0.59 -0.9 1,114,877 - Dsui_1078 0.60 -0.4 1,114,880 + Dsui_1078 0.61 +2.2 1,114,883 + Dsui_1078 0.62 +0.6 1,114,883 + Dsui_1078 0.62 +0.6 1,114,883 - Dsui_1078 0.62 -2.8 1,114,909 + Dsui_1078 0.72 -0.4 1,114,910 - Dsui_1078 0.72 -1.7 1,114,916 - Dsui_1078 0.75 -1.4 1,114,917 - Dsui_1078 0.75 +0.6 1,114,921 + Dsui_1078 0.76 +0.6 1,114,921 + Dsui_1078 0.76 +0.6 1,114,922 + Dsui_1078 0.77 +0.6 1,114,927 + Dsui_1078 0.79 -2.2 1,114,927 + Dsui_1078 0.79 -0.4 1,114,927 + Dsui_1078 0.79 -0.6 1,114,927 + Dsui_1078 0.79 -0.4 1,114,927 + Dsui_1078 0.79 -1.9 1,114,927 + Dsui_1078 0.79 +0.6 1,114,927 + Dsui_1078 0.79 +0.6 1,114,927 + Dsui_1078 0.79 +0.6 1,114,929 + Dsui_1078 0.79 +0.6 1,114,929 - Dsui_1078 0.79 +0.6 1,114,932 - Dsui_1078 0.81 -0.4 1,114,935 - Dsui_1078 0.82 -0.4 1,114,935 - Dsui_1078 0.82 +0.6 1,114,935 - Dsui_1078 0.82 +0.6 1,114,935 - Dsui_1078 0.82 -0.4 1,114,935 - Dsui_1078 0.82 -1.7 1,114,935 - Dsui_1078 0.82 -0.4 1,114,935 - Dsui_1078 0.82 +0.6 1,114,935 - Dsui_1078 0.82 +0.6 1,114,935 - Dsui_1078 0.82 -0.4 1,114,935 - Dsui_1078 0.82 -2.5 1,114,935 - Dsui_1078 0.82 -0.4 1,114,935 - Dsui_1078 0.82 -0.9 1,114,942 + Dsui_1078 0.84 -2.2 1,114,942 - Dsui_1078 0.84 -0.9 1,114,950 - Dsui_1078 0.87 -0.9 1,114,957 + -1.4 1,114,957 + +0.6 1,114,957 + -0.4 1,114,957 + -0.4 1,114,965 + +0.6 1,114,970 + -2.2 1,114,973 - +0.6 1,114,973 - -1.7 1,114,973 - +0.6
Or see this region's nucleotide sequence