Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0846 and Dsui_0847 overlap by 4 nucleotides Dsui_0847 and Dsui_0848 are separated by 4 nucleotides Dsui_0848 and Dsui_0849 overlap by 4 nucleotides
Dsui_0846: Dsui_0846 - glucose-inhibited division protein A, at 863,268 to 865,142
_0846
Dsui_0847: Dsui_0847 - 16S rRNA (guanine(527)-N(7))-methyltransferase GidB, at 865,139 to 865,780
_0847
Dsui_0848: Dsui_0848 - ATPase involved in chromosome partitioning, at 865,785 to 866,567
_0848
Dsui_0849: Dsui_0849 - ParB-like partition protein, at 866,564 to 867,397
_0849
Position (kb) 865
866
867 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 864.801 kb on + strand, within Dsui_0846 at 864.816 kb on + strand, within Dsui_0846 at 864.944 kb on + strand, within Dsui_0846 at 865.143 kb on - strand at 865.186 kb on + strand at 865.196 kb on + strand at 865.196 kb on + strand at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.224 kb on - strand, within Dsui_0847 at 865.233 kb on + strand, within Dsui_0847 at 865.275 kb on - strand, within Dsui_0847 at 865.282 kb on + strand, within Dsui_0847 at 865.291 kb on + strand, within Dsui_0847 at 865.299 kb on - strand, within Dsui_0847 at 865.299 kb on - strand, within Dsui_0847 at 865.313 kb on - strand, within Dsui_0847 at 865.565 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.775 kb on + strand at 865.790 kb on + strand at 867.531 kb on + strand at 867.539 kb on - strand at 867.548 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 864,801 + Dsui_0846 0.82 -3.2 864,816 + Dsui_0846 0.83 -2.2 864,944 + Dsui_0846 0.89 -0.5 865,143 - -2.1 865,186 + +0.1 865,196 + +0.5 865,196 + +0.8 865,216 + Dsui_0847 0.12 +0.4 865,216 + Dsui_0847 0.12 +0.9 865,216 + Dsui_0847 0.12 +0.9 865,216 + Dsui_0847 0.12 +0.3 865,224 - Dsui_0847 0.13 -1.1 865,233 + Dsui_0847 0.15 +0.9 865,275 - Dsui_0847 0.21 +0.5 865,282 + Dsui_0847 0.22 +0.4 865,291 + Dsui_0847 0.24 +0.8 865,299 - Dsui_0847 0.25 +0.5 865,299 - Dsui_0847 0.25 -2.3 865,313 - Dsui_0847 0.27 +0.5 865,565 + Dsui_0847 0.66 +0.2 865,608 + Dsui_0847 0.73 +1.1 865,608 + Dsui_0847 0.73 +0.6 865,712 + Dsui_0847 0.89 +0.7 865,712 + Dsui_0847 0.89 +0.2 865,775 + -0.6 865,790 + +0.1 867,531 + +0.2 867,539 - -0.5 867,548 + +0.6
Or see this region's nucleotide sequence