Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0845 and Dsui_0846 are separated by 273 nucleotides Dsui_0846 and Dsui_0847 overlap by 4 nucleotides Dsui_0847 and Dsui_0848 are separated by 4 nucleotides
Dsui_0845: Dsui_0845 - response regulator with CheY-like receiver, AAA-type ATPase, and DNA-binding domains, at 861,297 to 862,994
_0845
Dsui_0846: Dsui_0846 - glucose-inhibited division protein A, at 863,268 to 865,142
_0846
Dsui_0847: Dsui_0847 - 16S rRNA (guanine(527)-N(7))-methyltransferase GidB, at 865,139 to 865,780
_0847
Dsui_0848: Dsui_0848 - ATPase involved in chromosome partitioning, at 865,785 to 866,567
_0848
Position (kb) 863
864
865
866 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 862.283 kb on - strand, within Dsui_0845 at 862.296 kb on - strand, within Dsui_0845 at 862.306 kb on + strand, within Dsui_0845 at 862.315 kb on + strand, within Dsui_0845 at 862.370 kb on - strand, within Dsui_0845 at 862.384 kb on - strand, within Dsui_0845 at 862.426 kb on + strand, within Dsui_0845 at 862.441 kb on + strand, within Dsui_0845 at 862.467 kb on + strand, within Dsui_0845 at 862.467 kb on + strand, within Dsui_0845 at 862.469 kb on + strand at 862.539 kb on + strand, within Dsui_0845 at 862.589 kb on - strand, within Dsui_0845 at 862.592 kb on + strand, within Dsui_0845 at 862.623 kb on - strand, within Dsui_0845 at 862.645 kb on - strand, within Dsui_0845 at 862.688 kb on + strand, within Dsui_0845 at 862.698 kb on - strand, within Dsui_0845 at 862.698 kb on - strand, within Dsui_0845 at 862.700 kb on + strand, within Dsui_0845 at 862.743 kb on - strand, within Dsui_0845 at 862.743 kb on - strand, within Dsui_0845 at 862.795 kb on - strand, within Dsui_0845 at 862.928 kb on + strand at 862.929 kb on - strand at 862.938 kb on - strand at 862.942 kb on + strand at 863.041 kb on - strand at 863.068 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.206 kb on + strand at 863.214 kb on - strand at 863.779 kb on - strand at 864.061 kb on + strand, within Dsui_0846 at 864.268 kb on + strand, within Dsui_0846 at 864.385 kb on - strand at 864.455 kb on + strand, within Dsui_0846 at 864.523 kb on + strand, within Dsui_0846 at 864.704 kb on + strand, within Dsui_0846 at 864.725 kb on + strand, within Dsui_0846 at 864.801 kb on + strand, within Dsui_0846 at 864.816 kb on + strand, within Dsui_0846 at 864.944 kb on + strand, within Dsui_0846 at 865.143 kb on - strand at 865.186 kb on + strand at 865.196 kb on + strand at 865.196 kb on + strand at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.216 kb on + strand, within Dsui_0847 at 865.224 kb on - strand, within Dsui_0847 at 865.233 kb on + strand, within Dsui_0847 at 865.275 kb on - strand, within Dsui_0847 at 865.282 kb on + strand, within Dsui_0847 at 865.291 kb on + strand, within Dsui_0847 at 865.299 kb on - strand, within Dsui_0847 at 865.299 kb on - strand, within Dsui_0847 at 865.313 kb on - strand, within Dsui_0847 at 865.565 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.608 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.712 kb on + strand, within Dsui_0847 at 865.775 kb on + strand at 865.790 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 862,283 - Dsui_0845 0.58 +0.1 862,296 - Dsui_0845 0.59 -1.6 862,306 + Dsui_0845 0.59 -2.1 862,315 + Dsui_0845 0.60 -0.5 862,370 - Dsui_0845 0.63 +0.5 862,384 - Dsui_0845 0.64 +0.5 862,426 + Dsui_0845 0.66 -2.5 862,441 + Dsui_0845 0.67 -1.1 862,467 + Dsui_0845 0.69 -1.1 862,467 + Dsui_0845 0.69 -0.5 862,469 + +0.5 862,539 + Dsui_0845 0.73 -2.3 862,589 - Dsui_0845 0.76 -0.5 862,592 + Dsui_0845 0.76 +0.5 862,623 - Dsui_0845 0.78 -0.8 862,645 - Dsui_0845 0.79 +0.5 862,688 + Dsui_0845 0.82 -0.5 862,698 - Dsui_0845 0.83 +0.8 862,698 - Dsui_0845 0.83 -0.3 862,700 + Dsui_0845 0.83 +1.5 862,743 - Dsui_0845 0.85 -2.5 862,743 - Dsui_0845 0.85 -0.3 862,795 - Dsui_0845 0.88 -1.6 862,928 + -1.1 862,929 - +1.5 862,938 - -1.3 862,942 + +0.5 863,041 - +0.5 863,068 + -1.5 863,206 + +0.0 863,206 + -0.3 863,206 + -0.6 863,206 + -0.1 863,206 + -0.1 863,214 - -0.5 863,779 - +0.5 864,061 + Dsui_0846 0.42 -0.5 864,268 + Dsui_0846 0.53 +0.5 864,385 - -0.5 864,455 + Dsui_0846 0.63 -1.6 864,523 + Dsui_0846 0.67 -0.5 864,704 + Dsui_0846 0.77 -1.5 864,725 + Dsui_0846 0.78 -1.6 864,801 + Dsui_0846 0.82 -3.2 864,816 + Dsui_0846 0.83 -2.2 864,944 + Dsui_0846 0.89 -0.5 865,143 - -2.1 865,186 + +0.1 865,196 + +0.5 865,196 + +0.8 865,216 + Dsui_0847 0.12 +0.4 865,216 + Dsui_0847 0.12 +0.9 865,216 + Dsui_0847 0.12 +0.9 865,216 + Dsui_0847 0.12 +0.3 865,224 - Dsui_0847 0.13 -1.1 865,233 + Dsui_0847 0.15 +0.9 865,275 - Dsui_0847 0.21 +0.5 865,282 + Dsui_0847 0.22 +0.4 865,291 + Dsui_0847 0.24 +0.8 865,299 - Dsui_0847 0.25 +0.5 865,299 - Dsui_0847 0.25 -2.3 865,313 - Dsui_0847 0.27 +0.5 865,565 + Dsui_0847 0.66 +0.2 865,608 + Dsui_0847 0.73 +1.1 865,608 + Dsui_0847 0.73 +0.6 865,712 + Dsui_0847 0.89 +0.7 865,712 + Dsui_0847 0.89 +0.2 865,775 + -0.6 865,790 + +0.1
Or see this region's nucleotide sequence