Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0762 and Dsui_0763 are separated by 231 nucleotides Dsui_0763 and Dsui_0764 are separated by 13 nucleotides Dsui_0764 and Dsui_0765 are separated by 60 nucleotides
Dsui_0762: Dsui_0762 - formyltetrahydrofolate deformylase, at 763,287 to 764,147
_0762
Dsui_0763: Dsui_0763 - ammonium transporter, at 764,379 to 765,779
_0763
Dsui_0764: Dsui_0764 - nitrogen regulatory protein PII, at 765,793 to 766,131
_0764
Dsui_0765: Dsui_0765 - conserved hypothetical protein, proteobacterial, at 766,192 to 766,977
_0765
Position (kb)
764
765
766 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 764.273 kb on + strand at 764.290 kb on + strand at 764.342 kb on + strand at 764.415 kb on + strand at 764.415 kb on + strand at 764.527 kb on + strand at 764.535 kb on - strand at 764.535 kb on - strand at 764.592 kb on + strand, within Dsui_0763 at 764.714 kb on + strand, within Dsui_0763 at 764.721 kb on - strand, within Dsui_0763 at 764.729 kb on + strand, within Dsui_0763 at 764.755 kb on - strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.845 kb on + strand, within Dsui_0763 at 764.853 kb on - strand, within Dsui_0763 at 764.980 kb on - strand, within Dsui_0763 at 764.985 kb on - strand, within Dsui_0763 at 764.987 kb on + strand, within Dsui_0763 at 765.014 kb on + strand, within Dsui_0763 at 765.016 kb on - strand, within Dsui_0763 at 765.016 kb on - strand, within Dsui_0763 at 765.052 kb on + strand at 765.092 kb on - strand, within Dsui_0763 at 765.126 kb on + strand, within Dsui_0763 at 765.201 kb on + strand, within Dsui_0763 at 765.219 kb on - strand at 765.274 kb on - strand, within Dsui_0763 at 765.324 kb on + strand at 765.362 kb on + strand at 765.393 kb on + strand, within Dsui_0763 at 765.427 kb on - strand, within Dsui_0763 at 765.493 kb on - strand at 765.507 kb on + strand at 765.507 kb on + strand at 765.517 kb on + strand, within Dsui_0763 at 765.517 kb on + strand, within Dsui_0763 at 765.522 kb on + strand, within Dsui_0763 at 765.525 kb on - strand, within Dsui_0763 at 765.525 kb on - strand, within Dsui_0763 at 765.530 kb on - strand, within Dsui_0763 at 765.533 kb on + strand, within Dsui_0763 at 765.541 kb on - strand, within Dsui_0763 at 765.542 kb on - strand at 765.575 kb on + strand at 765.742 kb on + strand at 765.761 kb on - strand at 765.761 kb on - strand at 765.761 kb on - strand at 765.781 kb on + strand at 765.859 kb on + strand at 765.861 kb on - strand at 765.895 kb on + strand, within Dsui_0764 at 765.952 kb on - strand, within Dsui_0764 at 765.994 kb on + strand, within Dsui_0764 at 766.028 kb on + strand, within Dsui_0764 at 766.028 kb on + strand, within Dsui_0764 at 766.036 kb on - strand at 766.044 kb on + strand, within Dsui_0764 at 766.046 kb on + strand, within Dsui_0764 at 766.123 kb on - strand at 766.182 kb on - strand at 766.210 kb on + strand at 766.218 kb on - strand at 766.221 kb on - strand at 766.223 kb on - strand at 766.258 kb on - strand at 766.263 kb on - strand at 766.282 kb on + strand, within Dsui_0765 at 766.285 kb on - strand, within Dsui_0765 at 766.335 kb on - strand, within Dsui_0765 at 766.346 kb on + strand, within Dsui_0765 at 766.369 kb on - strand at 766.369 kb on - strand, within Dsui_0765 at 766.389 kb on - strand, within Dsui_0765 at 766.416 kb on + strand, within Dsui_0765 at 766.426 kb on - strand, within Dsui_0765 at 766.426 kb on - strand, within Dsui_0765 at 766.431 kb on - strand, within Dsui_0765 at 766.452 kb on + strand, within Dsui_0765 at 766.455 kb on - strand at 766.460 kb on - strand, within Dsui_0765 at 766.498 kb on + strand, within Dsui_0765 at 766.524 kb on + strand, within Dsui_0765 at 766.532 kb on - strand, within Dsui_0765 at 766.537 kb on + strand, within Dsui_0765 at 766.544 kb on - strand, within Dsui_0765 at 766.545 kb on - strand, within Dsui_0765 at 766.565 kb on + strand, within Dsui_0765 at 766.573 kb on + strand, within Dsui_0765 at 766.575 kb on + strand, within Dsui_0765 at 766.575 kb on + strand, within Dsui_0765 at 766.589 kb on + strand at 766.594 kb on + strand, within Dsui_0765 at 766.597 kb on - strand, within Dsui_0765 at 766.740 kb on + strand, within Dsui_0765 at 766.757 kb on - strand, within Dsui_0765
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 764,273 + -0.5 764,290 + +0.5 764,342 + +0.5 764,415 + -0.8 764,415 + -1.5 764,527 + +0.5 764,535 - +0.5 764,535 - +0.5 764,592 + Dsui_0763 0.15 +0.5 764,714 + Dsui_0763 0.24 -0.5 764,721 - Dsui_0763 0.24 -1.5 764,729 + Dsui_0763 0.25 -0.5 764,755 - Dsui_0763 0.27 -2.5 764,845 + Dsui_0763 0.33 -2.1 764,845 + Dsui_0763 0.33 -1.5 764,845 + Dsui_0763 0.33 -0.5 764,853 - Dsui_0763 0.34 -1.1 764,980 - Dsui_0763 0.43 -1.5 764,985 - Dsui_0763 0.43 -0.5 764,987 + Dsui_0763 0.43 -1.1 765,014 + Dsui_0763 0.45 -1.8 765,016 - Dsui_0763 0.45 +0.5 765,016 - Dsui_0763 0.45 -1.1 765,052 + +0.5 765,092 - Dsui_0763 0.51 -1.8 765,126 + Dsui_0763 0.53 -0.5 765,201 + Dsui_0763 0.59 -1.1 765,219 - +0.5 765,274 - Dsui_0763 0.64 -0.5 765,324 + +0.5 765,362 + +0.5 765,393 + Dsui_0763 0.72 +0.5 765,427 - Dsui_0763 0.75 -1.1 765,493 - +0.5 765,507 + +0.5 765,507 + +0.5 765,517 + Dsui_0763 0.81 -0.5 765,517 + Dsui_0763 0.81 -0.5 765,522 + Dsui_0763 0.82 -1.1 765,525 - Dsui_0763 0.82 -3.1 765,525 - Dsui_0763 0.82 -1.1 765,530 - Dsui_0763 0.82 -0.5 765,533 + Dsui_0763 0.82 -2.5 765,541 - Dsui_0763 0.83 +0.5 765,542 - +0.5 765,575 + -0.5 765,742 + -1.5 765,761 - -0.5 765,761 - -0.5 765,761 - +0.5 765,781 + +0.9 765,859 + +0.5 765,861 - +0.5 765,895 + Dsui_0764 0.30 +1.5 765,952 - Dsui_0764 0.47 -1.1 765,994 + Dsui_0764 0.59 -1.8 766,028 + Dsui_0764 0.69 -1.1 766,028 + Dsui_0764 0.69 -2.7 766,036 - +0.5 766,044 + Dsui_0764 0.74 +0.5 766,046 + Dsui_0764 0.75 -0.5 766,123 - -3.2 766,182 - -0.5 766,210 + -1.1 766,218 - -1.8 766,221 - -0.5 766,223 - -0.5 766,258 - -1.8 766,263 - +0.5 766,282 + Dsui_0765 0.11 -0.5 766,285 - Dsui_0765 0.12 -0.5 766,335 - Dsui_0765 0.18 -2.5 766,346 + Dsui_0765 0.20 -0.5 766,369 - +0.5 766,369 - Dsui_0765 0.23 -1.5 766,389 - Dsui_0765 0.25 +0.5 766,416 + Dsui_0765 0.28 -0.5 766,426 - Dsui_0765 0.30 +0.5 766,426 - Dsui_0765 0.30 -1.8 766,431 - Dsui_0765 0.30 -3.0 766,452 + Dsui_0765 0.33 -0.5 766,455 - +0.5 766,460 - Dsui_0765 0.34 -2.5 766,498 + Dsui_0765 0.39 +0.5 766,524 + Dsui_0765 0.42 -0.5 766,532 - Dsui_0765 0.43 -1.1 766,537 + Dsui_0765 0.44 -0.5 766,544 - Dsui_0765 0.45 -1.1 766,545 - Dsui_0765 0.45 -1.8 766,565 + Dsui_0765 0.47 -1.1 766,573 + Dsui_0765 0.48 -1.5 766,575 + Dsui_0765 0.49 +0.5 766,575 + Dsui_0765 0.49 +0.5 766,589 + +0.5 766,594 + Dsui_0765 0.51 +0.5 766,597 - Dsui_0765 0.52 -1.5 766,740 + Dsui_0765 0.70 -1.5 766,757 - Dsui_0765 0.72 -1.1
Or see this region's nucleotide sequence