Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0657 and Dsui_0658 are separated by 79 nucleotides Dsui_0658 and Dsui_0659 are separated by 14 nucleotides Dsui_0659 and Dsui_0660 are separated by 21 nucleotides Dsui_0660 and Dsui_0661 are separated by 90 nucleotides
Dsui_0657: Dsui_0657 - methyl-accepting chemotaxis protein, at 655,288 to 657,486
_0657
Dsui_0658: Dsui_0658 - chemotaxis signal transduction protein, at 657,566 to 658,078
_0658
Dsui_0659: Dsui_0659 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 658,093 to 658,455
_0659
Dsui_0660: Dsui_0660 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 658,477 to 658,875
_0660
Dsui_0661: Dsui_0661 - rubredoxin, at 658,966 to 659,166
_0661
Position (kb) 657
658
659 Strain fitness (log2 ratio) -2
-1
0
1 at 656.593 kb on - strand, within Dsui_0657 at 656.638 kb on - strand, within Dsui_0657 at 656.783 kb on - strand, within Dsui_0657 at 656.788 kb on - strand, within Dsui_0657 at 656.863 kb on - strand, within Dsui_0657 at 656.891 kb on + strand, within Dsui_0657 at 656.897 kb on + strand, within Dsui_0657 at 656.905 kb on - strand, within Dsui_0657 at 656.974 kb on + strand, within Dsui_0657 at 657.064 kb on - strand, within Dsui_0657 at 657.089 kb on + strand, within Dsui_0657 at 657.140 kb on + strand at 657.247 kb on - strand, within Dsui_0657 at 657.267 kb on - strand at 657.362 kb on + strand at 657.602 kb on + strand at 657.619 kb on + strand at 657.662 kb on + strand, within Dsui_0658 at 657.791 kb on - strand, within Dsui_0658 at 657.866 kb on - strand, within Dsui_0658 at 657.966 kb on - strand, within Dsui_0658 at 658.090 kb on + strand at 658.096 kb on - strand at 658.251 kb on + strand at 658.316 kb on - strand, within Dsui_0659 at 658.328 kb on + strand at 658.457 kb on + strand at 658.458 kb on - strand at 658.459 kb on - strand at 658.486 kb on - strand at 658.496 kb on - strand at 658.554 kb on + strand, within Dsui_0660 at 658.562 kb on - strand, within Dsui_0660 at 658.582 kb on - strand, within Dsui_0660 at 658.619 kb on + strand at 658.738 kb on - strand, within Dsui_0660 at 658.772 kb on - strand, within Dsui_0660 at 658.850 kb on - strand at 658.860 kb on - strand at 658.896 kb on + strand at 658.904 kb on - strand at 658.910 kb on - strand at 658.914 kb on - strand at 659.012 kb on + strand, within Dsui_0661
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 656,593 - Dsui_0657 0.59 -0.9 656,638 - Dsui_0657 0.61 -1.3 656,783 - Dsui_0657 0.68 -1.0 656,788 - Dsui_0657 0.68 -0.0 656,863 - Dsui_0657 0.72 -0.8 656,891 + Dsui_0657 0.73 -0.5 656,897 + Dsui_0657 0.73 -1.1 656,905 - Dsui_0657 0.74 -1.1 656,974 + Dsui_0657 0.77 +0.5 657,064 - Dsui_0657 0.81 +0.1 657,089 + Dsui_0657 0.82 -1.1 657,140 + +0.5 657,247 - Dsui_0657 0.89 -0.8 657,267 - -0.5 657,362 + +0.5 657,602 + -2.4 657,619 + +0.5 657,662 + Dsui_0658 0.19 +0.5 657,791 - Dsui_0658 0.44 -0.4 657,866 - Dsui_0658 0.58 +0.2 657,966 - Dsui_0658 0.78 -0.2 658,090 + +0.5 658,096 - +0.0 658,251 + +0.5 658,316 - Dsui_0659 0.61 -0.5 658,328 + +0.5 658,457 + +0.5 658,458 - -0.3 658,459 - -0.6 658,486 - -0.6 658,496 - -0.1 658,554 + Dsui_0660 0.19 -1.5 658,562 - Dsui_0660 0.21 -0.4 658,582 - Dsui_0660 0.26 -0.6 658,619 + +0.5 658,738 - Dsui_0660 0.65 +0.2 658,772 - Dsui_0660 0.74 -0.4 658,850 - -0.9 658,860 - -0.4 658,896 + +0.5 658,904 - -0.9 658,910 - -0.2 658,914 - +0.4 659,012 + Dsui_0661 0.23 +1.5
Or see this region's nucleotide sequence