Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0650 and Dsui_0651 are separated by 14 nucleotides Dsui_0651 and Dsui_0652 are separated by 4 nucleotides Dsui_0652 and Dsui_0653 are separated by 108 nucleotides
Dsui_0650: Dsui_0650 - hypothetical protein, at 643,600 to 644,280
_0650
Dsui_0651: Dsui_0651 - tyrosine recombinase XerC, at 644,295 to 645,200
_0651
Dsui_0652: Dsui_0652 - putative membrane protein, at 645,205 to 646,335
_0652
Dsui_0653: Dsui_0653 - putative SAM-dependent methyltransferase, at 646,444 to 647,631
_0653
Position (kb)
645
646
647 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 644.282 kb on - strand at 644.428 kb on + strand, within Dsui_0651 at 644.436 kb on - strand, within Dsui_0651 at 644.436 kb on - strand, within Dsui_0651 at 644.632 kb on - strand at 644.731 kb on - strand at 644.739 kb on - strand, within Dsui_0651 at 644.890 kb on + strand, within Dsui_0651 at 644.999 kb on - strand, within Dsui_0651 at 645.057 kb on + strand, within Dsui_0651 at 645.133 kb on - strand at 645.133 kb on - strand at 645.133 kb on - strand at 645.162 kb on + strand at 645.170 kb on - strand at 645.196 kb on + strand at 645.215 kb on - strand at 645.229 kb on + strand at 645.519 kb on - strand, within Dsui_0652 at 645.722 kb on + strand, within Dsui_0652 at 645.727 kb on + strand, within Dsui_0652 at 645.736 kb on - strand at 645.747 kb on + strand, within Dsui_0652 at 645.790 kb on + strand, within Dsui_0652 at 645.855 kb on - strand at 645.855 kb on - strand at 645.931 kb on + strand, within Dsui_0652 at 645.951 kb on + strand, within Dsui_0652 at 645.957 kb on + strand, within Dsui_0652 at 645.965 kb on + strand, within Dsui_0652 at 646.000 kb on + strand, within Dsui_0652 at 646.045 kb on - strand at 646.138 kb on - strand, within Dsui_0652 at 646.204 kb on - strand, within Dsui_0652 at 646.281 kb on - strand at 646.435 kb on + strand at 646.615 kb on + strand, within Dsui_0653 at 646.632 kb on + strand, within Dsui_0653 at 646.632 kb on + strand, within Dsui_0653 at 646.784 kb on - strand, within Dsui_0653 at 646.905 kb on - strand, within Dsui_0653 at 647.054 kb on + strand, within Dsui_0653 at 647.062 kb on - strand, within Dsui_0653 at 647.079 kb on + strand at 647.106 kb on - strand, within Dsui_0653 at 647.197 kb on + strand at 647.252 kb on - strand, within Dsui_0653 at 647.304 kb on + strand, within Dsui_0653 at 647.304 kb on + strand, within Dsui_0653 at 647.312 kb on - strand, within Dsui_0653
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 644,282 - -1.8 644,428 + Dsui_0651 0.15 -1.3 644,436 - Dsui_0651 0.16 -1.1 644,436 - Dsui_0651 0.16 -0.5 644,632 - +0.5 644,731 - +0.5 644,739 - Dsui_0651 0.49 -2.1 644,890 + Dsui_0651 0.66 -1.2 644,999 - Dsui_0651 0.78 +0.5 645,057 + Dsui_0651 0.84 -3.0 645,133 - +0.5 645,133 - +0.5 645,133 - +0.5 645,162 + -0.2 645,170 - -1.1 645,196 + -0.9 645,215 - -2.1 645,229 + -1.1 645,519 - Dsui_0652 0.28 -1.5 645,722 + Dsui_0652 0.46 -3.3 645,727 + Dsui_0652 0.46 +0.5 645,736 - +0.5 645,747 + Dsui_0652 0.48 -1.5 645,790 + Dsui_0652 0.52 +0.1 645,855 - +0.5 645,855 - +0.5 645,931 + Dsui_0652 0.64 -3.0 645,951 + Dsui_0652 0.66 -1.1 645,957 + Dsui_0652 0.66 +0.2 645,965 + Dsui_0652 0.67 -1.5 646,000 + Dsui_0652 0.70 -2.1 646,045 - +0.5 646,138 - Dsui_0652 0.82 -0.5 646,204 - Dsui_0652 0.88 +0.5 646,281 - +0.5 646,435 + -1.1 646,615 + Dsui_0653 0.14 -1.1 646,632 + Dsui_0653 0.16 -1.5 646,632 + Dsui_0653 0.16 -0.5 646,784 - Dsui_0653 0.29 -0.5 646,905 - Dsui_0653 0.39 -1.1 647,054 + Dsui_0653 0.51 +0.5 647,062 - Dsui_0653 0.52 -1.8 647,079 + +0.5 647,106 - Dsui_0653 0.56 -2.5 647,197 + +0.5 647,252 - Dsui_0653 0.68 -1.1 647,304 + Dsui_0653 0.72 -0.5 647,304 + Dsui_0653 0.72 -1.5 647,312 - Dsui_0653 0.73 -3.0
Or see this region's nucleotide sequence