Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0453 and Dsui_0454 overlap by 17 nucleotides Dsui_0454 and Dsui_0455 are separated by 3 nucleotides Dsui_0455 and Dsui_0456 are separated by 90 nucleotides
Dsui_0453: Dsui_0453 - nicotinate/nicotinamide nucleotide adenylyltransferase, at 458,536 to 459,210
_0453
Dsui_0454: Dsui_0454 - hypothetical protein, at 459,194 to 460,024
_0454
Dsui_0455: Dsui_0455 - putative integral membrane protein, at 460,028 to 460,786
_0455
Dsui_0456: Dsui_0456 - homoserine kinase, Neisseria type, at 460,877 to 461,818
_0456
Position (kb) 460
461 Strain fitness (log2 ratio) -4
-3
-2
-1
0
1 at 459.200 kb on - strand at 459.200 kb on - strand at 459.231 kb on - strand at 459.431 kb on - strand, within Dsui_0454 at 459.543 kb on - strand, within Dsui_0454 at 459.942 kb on - strand at 459.973 kb on - strand at 460.021 kb on + strand at 460.059 kb on + strand at 460.067 kb on - strand at 460.067 kb on - strand at 460.140 kb on + strand at 460.148 kb on - strand, within Dsui_0455 at 460.226 kb on - strand, within Dsui_0455 at 460.241 kb on - strand, within Dsui_0455 at 460.435 kb on + strand at 460.439 kb on - strand, within Dsui_0455 at 460.449 kb on - strand, within Dsui_0455 at 460.609 kb on - strand, within Dsui_0455 at 460.611 kb on + strand at 460.619 kb on - strand, within Dsui_0455 at 460.645 kb on - strand, within Dsui_0455 at 460.650 kb on + strand at 460.926 kb on - strand at 461.120 kb on - strand, within Dsui_0456 at 461.139 kb on - strand, within Dsui_0456 at 461.226 kb on + strand, within Dsui_0456 at 461.257 kb on - strand, within Dsui_0456 at 461.276 kb on + strand, within Dsui_0456 at 461.290 kb on - strand, within Dsui_0456 at 461.444 kb on + strand, within Dsui_0456 at 461.452 kb on - strand, within Dsui_0456 at 461.456 kb on + strand, within Dsui_0456 at 461.551 kb on + strand, within Dsui_0456 at 461.655 kb on + strand, within Dsui_0456
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 459,200 - -1.9 459,200 - -0.4 459,231 - -1.4 459,431 - Dsui_0454 0.29 -1.3 459,543 - Dsui_0454 0.42 -1.8 459,942 - -1.4 459,973 - -4.1 460,021 + +0.5 460,059 + -1.5 460,067 - -1.1 460,067 - -1.0 460,140 + +0.5 460,148 - Dsui_0455 0.16 -0.8 460,226 - Dsui_0455 0.26 -1.3 460,241 - Dsui_0455 0.28 -0.3 460,435 + +0.5 460,439 - Dsui_0455 0.54 -1.5 460,449 - Dsui_0455 0.55 -1.3 460,609 - Dsui_0455 0.77 -0.6 460,611 + +0.5 460,619 - Dsui_0455 0.78 -0.8 460,645 - Dsui_0455 0.81 -1.3 460,650 + +0.5 460,926 - -0.2 461,120 - Dsui_0456 0.26 +0.3 461,139 - Dsui_0456 0.28 -0.1 461,226 + Dsui_0456 0.37 -1.5 461,257 - Dsui_0456 0.40 -0.3 461,276 + Dsui_0456 0.42 -1.1 461,290 - Dsui_0456 0.44 -0.1 461,444 + Dsui_0456 0.60 -0.5 461,452 - Dsui_0456 0.61 -0.3 461,456 + Dsui_0456 0.61 +0.5 461,551 + Dsui_0456 0.72 -1.5 461,655 + Dsui_0456 0.83 -0.5
Or see this region's nucleotide sequence