Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0411 and Dsui_0412 are separated by 47 nucleotides Dsui_0412 and Dsui_0413 are separated by 13 nucleotides Dsui_0413 and Dsui_0414 overlap by 4 nucleotides
Dsui_0411: Dsui_0411 - ABC-type dipeptide transport system, periplasmic component, at 411,635 to 413,245
_0411
Dsui_0412: Dsui_0412 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 413,293 to 414,246
_0412
Dsui_0413: Dsui_0413 - ABC-type dipeptide/oligopeptide/nickel transport system, permease component, at 414,260 to 415,153
_0413
Dsui_0414: Dsui_0414 - oligopeptide/dipeptide ABC transporter, ATP-binding protein, at 415,150 to 416,208
_0414
Position (kb) 413
414
415 Strain fitness (log2 ratio) -2
-1
0
1 at 412.324 kb on + strand, within Dsui_0411 at 412.441 kb on + strand at 412.441 kb on + strand, within Dsui_0411 at 412.494 kb on - strand, within Dsui_0411 at 412.679 kb on - strand, within Dsui_0411 at 412.722 kb on + strand, within Dsui_0411 at 412.730 kb on - strand, within Dsui_0411 at 412.745 kb on - strand, within Dsui_0411 at 412.759 kb on + strand at 412.759 kb on + strand, within Dsui_0411 at 412.839 kb on + strand, within Dsui_0411 at 412.839 kb on + strand, within Dsui_0411 at 412.944 kb on - strand, within Dsui_0411 at 412.960 kb on - strand, within Dsui_0411 at 413.039 kb on - strand, within Dsui_0411 at 413.085 kb on - strand at 413.268 kb on - strand at 413.269 kb on - strand at 413.327 kb on - strand at 413.402 kb on - strand, within Dsui_0412 at 413.448 kb on - strand, within Dsui_0412 at 413.469 kb on + strand at 413.527 kb on - strand at 413.527 kb on - strand, within Dsui_0412 at 413.623 kb on + strand, within Dsui_0412 at 413.724 kb on + strand, within Dsui_0412 at 413.872 kb on + strand at 413.902 kb on - strand, within Dsui_0412 at 413.965 kb on - strand, within Dsui_0412 at 414.109 kb on - strand, within Dsui_0412 at 414.221 kb on - strand at 414.365 kb on + strand at 414.583 kb on - strand at 414.640 kb on - strand at 414.845 kb on + strand, within Dsui_0413 at 414.965 kb on - strand at 415.013 kb on + strand at 415.018 kb on + strand at 415.076 kb on + strand at 415.101 kb on + strand at 415.101 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 412,324 + Dsui_0411 0.43 -2.5 412,441 + -0.5 412,441 + Dsui_0411 0.50 -1.1 412,494 - Dsui_0411 0.53 +0.5 412,679 - Dsui_0411 0.65 -1.5 412,722 + Dsui_0411 0.67 -1.1 412,730 - Dsui_0411 0.68 +0.5 412,745 - Dsui_0411 0.69 -0.5 412,759 + +0.5 412,759 + Dsui_0411 0.70 +0.5 412,839 + Dsui_0411 0.75 -1.8 412,839 + Dsui_0411 0.75 -1.5 412,944 - Dsui_0411 0.81 +0.5 412,960 - Dsui_0411 0.82 -1.4 413,039 - Dsui_0411 0.87 +0.5 413,085 - +0.5 413,268 - -0.5 413,269 - -2.1 413,327 - -1.5 413,402 - Dsui_0412 0.11 -2.5 413,448 - Dsui_0412 0.16 -1.5 413,469 + +0.5 413,527 - +0.5 413,527 - Dsui_0412 0.25 -1.1 413,623 + Dsui_0412 0.35 +0.5 413,724 + Dsui_0412 0.45 +0.5 413,872 + +0.5 413,902 - Dsui_0412 0.64 -1.5 413,965 - Dsui_0412 0.70 +0.5 414,109 - Dsui_0412 0.86 -1.5 414,221 - -0.5 414,365 + -0.5 414,583 - -0.5 414,640 - -0.5 414,845 + Dsui_0413 0.65 -1.1 414,965 - -1.1 415,013 + -0.5 415,018 + -1.1 415,076 + +0.5 415,101 + +0.5 415,101 + +0.5
Or see this region's nucleotide sequence