Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0389 and Dsui_0390 are separated by 6 nucleotides Dsui_0390 and Dsui_0391 overlap by 4 nucleotides Dsui_0391 and Dsui_0392 are separated by 96 nucleotides Dsui_0392 and Dsui_0393 are separated by 73 nucleotides
Dsui_0389: Dsui_0389 - acetyl-CoA carboxylase, biotin carboxylase subunit, at 387,629 to 388,996
_0389
Dsui_0390: Dsui_0390 - ribosomal protein L11 methyltransferase, at 389,003 to 389,890
_0390
Dsui_0391: Dsui_0391 - Protein of unknown function (DUF3426), at 389,887 to 390,879
_0391
Dsui_0392: Dsui_0392 - diacylglycerol kinase, at 390,976 to 391,362
_0392
Dsui_0393: Dsui_0393 - glycosyltransferase, at 391,436 to 392,680
_0393
Position (kb)
389
390
391 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 389.051 kb on + strand at 389.128 kb on - strand, within Dsui_0390 at 389.176 kb on - strand, within Dsui_0390 at 389.205 kb on - strand, within Dsui_0390 at 389.301 kb on + strand, within Dsui_0390 at 389.309 kb on - strand, within Dsui_0390 at 389.323 kb on + strand, within Dsui_0390 at 389.350 kb on + strand, within Dsui_0390 at 389.455 kb on + strand, within Dsui_0390 at 389.468 kb on - strand at 389.611 kb on + strand, within Dsui_0390 at 389.619 kb on - strand, within Dsui_0390 at 389.706 kb on - strand, within Dsui_0390 at 389.739 kb on - strand, within Dsui_0390 at 389.741 kb on + strand, within Dsui_0390 at 389.781 kb on - strand, within Dsui_0390 at 389.904 kb on + strand at 389.912 kb on - strand at 389.927 kb on + strand at 389.947 kb on - strand at 389.947 kb on - strand at 389.957 kb on - strand at 389.957 kb on - strand at 389.957 kb on - strand at 390.139 kb on - strand, within Dsui_0391 at 390.192 kb on + strand, within Dsui_0391 at 390.905 kb on + strand at 390.908 kb on - strand at 390.913 kb on - strand at 390.961 kb on + strand at 390.966 kb on - strand at 391.003 kb on - strand at 391.020 kb on - strand, within Dsui_0392 at 391.030 kb on + strand, within Dsui_0392 at 391.047 kb on + strand, within Dsui_0392 at 391.050 kb on - strand at 391.055 kb on - strand, within Dsui_0392 at 391.133 kb on - strand, within Dsui_0392 at 391.166 kb on + strand, within Dsui_0392 at 391.170 kb on + strand, within Dsui_0392 at 391.179 kb on - strand, within Dsui_0392 at 391.204 kb on + strand at 391.343 kb on + strand at 391.483 kb on - strand at 391.562 kb on + strand at 391.564 kb on - strand, within Dsui_0393 at 391.724 kb on - strand, within Dsui_0393 at 391.748 kb on + strand at 391.778 kb on + strand, within Dsui_0393 at 391.799 kb on + strand, within Dsui_0393 at 391.807 kb on - strand, within Dsui_0393
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 389,051 + -0.7 389,128 - Dsui_0390 0.14 -1.8 389,176 - Dsui_0390 0.19 -2.7 389,205 - Dsui_0390 0.23 -1.1 389,301 + Dsui_0390 0.34 -0.3 389,309 - Dsui_0390 0.34 -1.5 389,323 + Dsui_0390 0.36 -0.1 389,350 + Dsui_0390 0.39 -0.3 389,455 + Dsui_0390 0.51 -0.1 389,468 - +0.5 389,611 + Dsui_0390 0.68 -0.1 389,619 - Dsui_0390 0.69 -0.5 389,706 - Dsui_0390 0.79 +0.5 389,739 - Dsui_0390 0.83 -0.5 389,741 + Dsui_0390 0.83 -0.3 389,781 - Dsui_0390 0.88 -1.8 389,904 + -0.2 389,912 - +0.5 389,927 + -0.9 389,947 - -1.7 389,947 - -0.5 389,957 - -0.7 389,957 - +0.5 389,957 - -0.5 390,139 - Dsui_0391 0.25 -0.5 390,192 + Dsui_0391 0.31 -0.6 390,905 + -0.2 390,908 - +0.5 390,913 - +1.8 390,961 + -2.7 390,966 - -1.1 391,003 - -0.5 391,020 - Dsui_0392 0.11 -2.3 391,030 + Dsui_0392 0.14 -1.1 391,047 + Dsui_0392 0.18 -0.5 391,050 - -0.5 391,055 - Dsui_0392 0.20 +0.5 391,133 - Dsui_0392 0.41 -0.5 391,166 + Dsui_0392 0.49 -1.1 391,170 + Dsui_0392 0.50 -2.3 391,179 - Dsui_0392 0.52 +0.5 391,204 + +0.5 391,343 + -0.5 391,483 - -0.5 391,562 + -0.5 391,564 - Dsui_0393 0.10 -0.5 391,724 - Dsui_0393 0.23 -1.5 391,748 + +0.5 391,778 + Dsui_0393 0.27 +0.5 391,799 + Dsui_0393 0.29 -1.8 391,807 - Dsui_0393 0.30 +0.5
Or see this region's nucleotide sequence