Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0254 and Dsui_0255 are separated by 133 nucleotides Dsui_0255 and Dsui_0256 are separated by 192 nucleotides Dsui_0256 and Dsui_0257 are separated by 46 nucleotides
Dsui_0254: Dsui_0254 - tyrosyl-tRNA synthetase, at 251,813 to 253,087
_0254
Dsui_0255: Dsui_0255 - hypothetical protein, at 253,221 to 254,048
_0255
Dsui_0256: Dsui_0256 - glutathione peroxidase, at 254,241 to 254,810
_0256
Dsui_0257: Dsui_0257 - hypothetical protein, at 254,857 to 255,660
_0257
Position (kb) 253
254
255 Strain fitness (log2 ratio) -3
-2
-1
0
1 at 253.218 kb on + strand at 253.265 kb on - strand at 253.338 kb on - strand, within Dsui_0255 at 253.416 kb on + strand at 253.560 kb on - strand, within Dsui_0255 at 253.564 kb on - strand, within Dsui_0255 at 253.601 kb on - strand, within Dsui_0255 at 253.959 kb on - strand, within Dsui_0255 at 254.056 kb on - strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.084 kb on + strand at 254.090 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.092 kb on - strand at 254.138 kb on - strand at 254.155 kb on - strand at 254.218 kb on + strand at 254.222 kb on + strand at 254.417 kb on + strand, within Dsui_0256 at 254.425 kb on - strand, within Dsui_0256 at 254.490 kb on + strand, within Dsui_0256 at 254.498 kb on - strand, within Dsui_0256 at 254.607 kb on - strand, within Dsui_0256 at 254.609 kb on + strand, within Dsui_0256 at 254.644 kb on + strand, within Dsui_0256 at 254.655 kb on + strand, within Dsui_0256 at 254.666 kb on + strand, within Dsui_0256 at 254.669 kb on - strand, within Dsui_0256 at 254.822 kb on + strand at 254.893 kb on + strand at 255.020 kb on - strand, within Dsui_0257 at 255.047 kb on - strand, within Dsui_0257
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 253,218 + -1.8 253,265 - -1.8 253,338 - Dsui_0255 0.14 -1.9 253,416 + -0.5 253,560 - Dsui_0255 0.41 -1.6 253,564 - Dsui_0255 0.41 -1.2 253,601 - Dsui_0255 0.46 -2.5 253,959 - Dsui_0255 0.89 -2.2 254,056 - -0.2 254,084 + +0.5 254,084 + -0.5 254,084 + +0.5 254,084 + +0.5 254,084 + -1.1 254,084 + -1.8 254,084 + +0.5 254,084 + +0.5 254,084 + +0.5 254,084 + -0.5 254,084 + +0.5 254,084 + +0.5 254,084 + +0.5 254,084 + +0.5 254,090 - -0.6 254,092 - -0.7 254,092 - +0.4 254,092 - +0.3 254,092 - -0.4 254,092 - +0.4 254,092 - +0.1 254,092 - +0.4 254,092 - +0.3 254,092 - -0.2 254,092 - +0.5 254,092 - -0.1 254,138 - +0.5 254,155 - -2.8 254,218 + -0.1 254,222 + +0.2 254,417 + Dsui_0256 0.31 -0.4 254,425 - Dsui_0256 0.32 -0.5 254,490 + Dsui_0256 0.44 +0.5 254,498 - Dsui_0256 0.45 -0.5 254,607 - Dsui_0256 0.64 -1.1 254,609 + Dsui_0256 0.65 -0.1 254,644 + Dsui_0256 0.71 -1.0 254,655 + Dsui_0256 0.73 +0.6 254,666 + Dsui_0256 0.75 -0.3 254,669 - Dsui_0256 0.75 -1.5 254,822 + -0.5 254,893 + -0.5 255,020 - Dsui_0257 0.20 +0.5 255,047 - Dsui_0257 0.24 -0.5
Or see this region's nucleotide sequence