Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_0175 and Dsui_0176 are separated by 2 nucleotides Dsui_0176 and Dsui_0177 are separated by 171 nucleotides Dsui_0177 and Dsui_0178 are separated by 28 nucleotides Dsui_0178 and Dsui_0179 are separated by 15 nucleotides Dsui_0179 and Dsui_0180 are separated by 1 nucleotides
Dsui_0175: Dsui_0175 - hypothetical protein, at 178,073 to 179,881
_0175
Dsui_0176: Dsui_0176 - ribosome modulation factor, at 179,884 to 180,588
_0176
Dsui_0177: Dsui_0177 - hypothetical protein, at 180,760 to 181,641
_0177
Dsui_0178: Dsui_0178 - hypothetical protein, at 181,670 to 182,509
_0178
Dsui_0179: Dsui_0179 - hypothetical protein, at 182,525 to 182,614
_0179
Dsui_0180: Dsui_0180 - hypothetical protein, at 182,616 to 182,885
_0180
Position (kb) 180
181
182 Strain fitness (log2 ratio) -2
-1
0
1 at 179.776 kb on + strand at 179.840 kb on + strand at 179.851 kb on - strand at 179.930 kb on + strand at 180.027 kb on - strand at 180.077 kb on + strand, within Dsui_0176 at 180.195 kb on + strand, within Dsui_0176 at 180.288 kb on - strand, within Dsui_0176 at 180.365 kb on - strand at 180.403 kb on - strand, within Dsui_0176 at 180.470 kb on + strand, within Dsui_0176 at 180.470 kb on + strand at 180.478 kb on - strand at 180.478 kb on - strand, within Dsui_0176 at 180.726 kb on - strand at 181.007 kb on - strand, within Dsui_0177 at 181.034 kb on + strand, within Dsui_0177 at 181.145 kb on - strand, within Dsui_0177 at 181.184 kb on + strand at 181.184 kb on + strand, within Dsui_0177 at 181.216 kb on + strand, within Dsui_0177 at 181.387 kb on - strand, within Dsui_0177 at 181.390 kb on + strand at 181.398 kb on - strand, within Dsui_0177 at 181.467 kb on + strand, within Dsui_0177 at 181.503 kb on + strand, within Dsui_0177 at 181.511 kb on - strand, within Dsui_0177 at 181.514 kb on + strand, within Dsui_0177 at 181.564 kb on + strand at 181.643 kb on + strand at 181.651 kb on - strand at 181.653 kb on + strand at 181.704 kb on + strand at 181.716 kb on + strand at 181.774 kb on - strand, within Dsui_0178 at 181.829 kb on - strand at 181.861 kb on + strand, within Dsui_0178 at 181.869 kb on - strand, within Dsui_0178 at 182.114 kb on + strand, within Dsui_0178 at 182.191 kb on + strand, within Dsui_0178 at 182.191 kb on + strand, within Dsui_0178 at 182.280 kb on + strand, within Dsui_0178 at 182.546 kb on + strand, within Dsui_0179 at 182.546 kb on + strand, within Dsui_0179
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0008 mg/ml remove 179,776 + +0.5 179,840 + -1.5 179,851 - +0.5 179,930 + +0.5 180,027 - -0.5 180,077 + Dsui_0176 0.27 -0.5 180,195 + Dsui_0176 0.44 -0.5 180,288 - Dsui_0176 0.57 -1.5 180,365 - -1.1 180,403 - Dsui_0176 0.74 -0.5 180,470 + Dsui_0176 0.83 -1.5 180,470 + +0.5 180,478 - +0.5 180,478 - Dsui_0176 0.84 +0.5 180,726 - -0.5 181,007 - Dsui_0177 0.28 -0.5 181,034 + Dsui_0177 0.31 -0.5 181,145 - Dsui_0177 0.44 -2.1 181,184 + +0.5 181,184 + Dsui_0177 0.48 +0.5 181,216 + Dsui_0177 0.52 -0.5 181,387 - Dsui_0177 0.71 -1.1 181,390 + +0.5 181,398 - Dsui_0177 0.72 +0.5 181,467 + Dsui_0177 0.80 +0.5 181,503 + Dsui_0177 0.84 -2.5 181,511 - Dsui_0177 0.85 -0.5 181,514 + Dsui_0177 0.85 +0.5 181,564 + +0.5 181,643 + +0.5 181,651 - +0.5 181,653 + +0.5 181,704 + +0.5 181,716 + -0.5 181,774 - Dsui_0178 0.12 +0.5 181,829 - +0.5 181,861 + Dsui_0178 0.23 -1.1 181,869 - Dsui_0178 0.24 +0.5 182,114 + Dsui_0178 0.53 -1.5 182,191 + Dsui_0178 0.62 +0.5 182,191 + Dsui_0178 0.62 +0.5 182,280 + Dsui_0178 0.73 -0.5 182,546 + Dsui_0179 0.23 -1.1 182,546 + Dsui_0179 0.23 -0.5
Or see this region's nucleotide sequence