Strain Fitness in Dechlorosoma suillum PS around Dsui_0033
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
28,225 | + | -0.5 | |||
28,273 | + | -0.5 | |||
28,284 | + | -1.1 | |||
28,326 | - | +0.5 | |||
28,350 | + | +0.5 | |||
28,398 | + | Dsui_0032 | 0.16 | +0.5 | |
28,474 | + | Dsui_0032 | 0.25 | -1.1 | |
28,477 | - | +0.5 | |||
28,685 | - | -1.1 | |||
28,694 | + | +0.5 | |||
28,893 | + | Dsui_0032 | 0.76 | +0.5 | |
28,967 | + | +0.5 | |||
28,975 | - | Dsui_0032 | 0.85 | -1.5 | |
28,999 | + | -0.5 | |||
29,007 | - | Dsui_0032 | 0.89 | -1.5 | |
29,007 | - | +0.5 | |||
29,024 | - | +0.5 | |||
29,107 | - | -0.5 | |||
29,107 | - | +0.5 | |||
29,157 | - | -1.5 | |||
29,280 | - | -1.1 | |||
29,299 | + | Dsui_0033 | 0.14 | -1.1 | |
29,458 | + | Dsui_0033 | 0.33 | +0.5 | |
29,507 | - | +0.5 | |||
29,600 | + | Dsui_0033 | 0.50 | -1.2 | |
29,718 | + | Dsui_0033 | 0.65 | -3.0 | |
29,864 | + | Dsui_0033 | 0.82 | -1.6 | |
29,951 | - | -0.5 | |||
30,106 | - | -1.1 | |||
30,123 | + | +0.5 | |||
30,172 | + | -1.1 | |||
30,175 | - | -1.1 | |||
30,219 | - | -1.1 | |||
30,277 | - | Dsui_0034 | 0.12 | +0.5 | |
30,316 | - | Dsui_0034 | 0.15 | -2.3 | |
30,327 | - | +0.5 | |||
30,409 | - | Dsui_0034 | 0.21 | +0.5 | |
30,481 | - | Dsui_0034 | 0.26 | -1.5 | |
30,800 | + | Dsui_0034 | 0.49 | -0.5 | |
30,808 | - | Dsui_0034 | 0.49 | -0.5 | |
30,947 | + | Dsui_0034 | 0.59 | -0.5 | |
30,968 | + | Dsui_0034 | 0.60 | -0.5 |
Or see this region's nucleotide sequence