Strain Fitness in Dechlorosoma suillum PS around Dsui_0015
Experiment: ALP with Cisplatin 0.0008 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0008 mg/ml |
---|---|---|---|---|---|
remove | |||||
12,604 | - | +0.5 | |||
12,609 | - | -2.3 | |||
12,711 | - | -0.5 | |||
12,781 | - | -0.5 | |||
12,781 | - | +0.5 | |||
12,929 | + | Dsui_0014 | 0.27 | -3.2 | |
12,935 | + | Dsui_0014 | 0.28 | -1.5 | |
12,950 | + | Dsui_0014 | 0.30 | -1.2 | |
12,954 | - | Dsui_0014 | 0.31 | -1.1 | |
12,954 | - | +0.5 | |||
13,011 | + | Dsui_0014 | 0.40 | -1.3 | |
13,040 | + | Dsui_0014 | 0.45 | -1.2 | |
13,040 | + | Dsui_0014 | 0.45 | +0.1 | |
13,048 | - | -0.5 | |||
13,048 | - | Dsui_0014 | 0.46 | -1.5 | |
13,127 | - | +0.5 | |||
13,223 | - | Dsui_0014 | 0.75 | +0.5 | |
13,225 | - | +0.5 | |||
13,238 | + | Dsui_0014 | 0.77 | -0.7 | |
13,253 | + | Dsui_0014 | 0.80 | -0.5 | |
13,289 | + | Dsui_0014 | 0.86 | -1.3 | |
13,297 | - | Dsui_0014 | 0.87 | -1.8 | |
13,308 | - | Dsui_0014 | 0.89 | -0.5 | |
13,357 | - | -0.5 | |||
13,457 | + | -0.5 | |||
13,510 | - | +0.5 | |||
13,522 | - | -1.1 | |||
13,525 | + | -2.5 | |||
13,525 | + | -0.5 | |||
13,598 | - | Dsui_0015 | 0.20 | -0.5 | |
13,609 | + | Dsui_0015 | 0.22 | -1.1 | |
13,678 | + | Dsui_0015 | 0.38 | -1.5 | |
13,678 | + | +0.5 | |||
13,696 | + | +0.5 | |||
13,786 | + | Dsui_0015 | 0.63 | -1.1 | |
13,786 | - | -0.5 | |||
13,853 | - | +0.5 | |||
13,935 | + | -1.5 | |||
14,245 | - | Dsui_0016 | 0.29 | -1.1 | |
14,266 | - | Dsui_0016 | 0.31 | +1.1 | |
14,346 | + | -0.5 | |||
14,370 | - | Dsui_0016 | 0.43 | +0.7 | |
14,396 | + | Dsui_0016 | 0.45 | -1.5 | |
14,423 | - | Dsui_0016 | 0.48 | -0.7 | |
14,521 | - | Dsui_0016 | 0.59 | -0.5 | |
14,539 | - | Dsui_0016 | 0.61 | +0.4 | |
14,606 | + | Dsui_0016 | 0.69 | -0.5 | |
14,673 | + | Dsui_0016 | 0.76 | -1.8 | |
14,708 | + | Dsui_0016 | 0.80 | -0.5 | |
14,769 | + | +0.5 | |||
14,776 | - | Dsui_0016 | 0.87 | -0.7 | |
14,776 | - | Dsui_0016 | 0.87 | -0.4 | |
14,866 | + | -0.5 | |||
14,866 | + | +0.5 |
Or see this region's nucleotide sequence