Experiment: L-Malic (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS30520 and AZOBR_RS30525 are separated by 16 nucleotides AZOBR_RS30525 and AZOBR_RS30530 are separated by 281 nucleotides
AZOBR_RS30520: AZOBR_RS30520 - flagellar motor protein MotA, at 195,155 to 196,015
_RS30520
AZOBR_RS30525: AZOBR_RS30525 - hypothetical protein, at 196,032 to 197,018
_RS30525
AZOBR_RS30530: AZOBR_RS30530 - peptidase M23, at 197,300 to 198,643
_RS30530
Position (kb) 196
197
198 Strain fitness (log2 ratio) -5
-4
-3
-2
-1
0
1 at 195.035 kb on - strand at 195.207 kb on - strand at 195.523 kb on - strand, within AZOBR_RS30520 at 195.539 kb on + strand, within AZOBR_RS30520 at 195.539 kb on + strand, within AZOBR_RS30520 at 195.539 kb on + strand, within AZOBR_RS30520 at 195.803 kb on + strand, within AZOBR_RS30520 at 195.804 kb on - strand, within AZOBR_RS30520 at 195.845 kb on + strand, within AZOBR_RS30520 at 195.846 kb on - strand, within AZOBR_RS30520 at 195.863 kb on + strand, within AZOBR_RS30520 at 195.863 kb on + strand, within AZOBR_RS30520 at 195.864 kb on - strand, within AZOBR_RS30520 at 195.864 kb on - strand, within AZOBR_RS30520 at 195.867 kb on - strand, within AZOBR_RS30520 at 196.791 kb on + strand, within AZOBR_RS30525 at 196.791 kb on + strand, within AZOBR_RS30525 at 196.815 kb on + strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 196.816 kb on - strand, within AZOBR_RS30525 at 197.112 kb on + strand at 197.112 kb on + strand at 197.112 kb on + strand at 197.270 kb on - strand at 197.270 kb on - strand at 197.270 kb on - strand at 197.508 kb on + strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.509 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.551 kb on - strand, within AZOBR_RS30530 at 197.622 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.661 kb on + strand, within AZOBR_RS30530 at 197.662 kb on - strand, within AZOBR_RS30530 at 197.662 kb on - strand, within AZOBR_RS30530 at 197.671 kb on - strand, within AZOBR_RS30530 at 197.877 kb on + strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.878 kb on - strand, within AZOBR_RS30530 at 197.914 kb on - strand, within AZOBR_RS30530 at 197.914 kb on - strand, within AZOBR_RS30530 at 197.923 kb on - strand, within AZOBR_RS30530 at 198.007 kb on - strand, within AZOBR_RS30530 at 198.007 kb on - strand, within AZOBR_RS30530
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 8 days remove 195,035 - -2.4 195,207 - -3.0 195,523 - AZOBR_RS30520 0.43 -2.1 195,539 + AZOBR_RS30520 0.45 -3.5 195,539 + AZOBR_RS30520 0.45 +0.3 195,539 + AZOBR_RS30520 0.45 -5.0 195,803 + AZOBR_RS30520 0.75 -2.5 195,804 - AZOBR_RS30520 0.75 -4.3 195,845 + AZOBR_RS30520 0.80 -2.9 195,846 - AZOBR_RS30520 0.80 -5.6 195,863 + AZOBR_RS30520 0.82 -2.9 195,863 + AZOBR_RS30520 0.82 -4.2 195,864 - AZOBR_RS30520 0.82 -3.5 195,864 - AZOBR_RS30520 0.82 +0.3 195,867 - AZOBR_RS30520 0.83 -5.0 196,791 + AZOBR_RS30525 0.77 +0.4 196,791 + AZOBR_RS30525 0.77 -0.1 196,815 + AZOBR_RS30525 0.79 +0.2 196,816 - AZOBR_RS30525 0.79 -1.4 196,816 - AZOBR_RS30525 0.79 +0.2 196,816 - AZOBR_RS30525 0.79 -0.5 197,112 + +0.2 197,112 + -1.1 197,112 + +0.8 197,270 - +0.3 197,270 - -0.9 197,270 - +0.5 197,508 + AZOBR_RS30530 0.15 +0.1 197,509 - AZOBR_RS30530 0.16 +0.6 197,509 - AZOBR_RS30530 0.16 +0.8 197,509 - AZOBR_RS30530 0.16 -0.7 197,551 - AZOBR_RS30530 0.19 +0.0 197,551 - AZOBR_RS30530 0.19 +0.9 197,551 - AZOBR_RS30530 0.19 +0.1 197,622 + AZOBR_RS30530 0.24 +0.2 197,661 + AZOBR_RS30530 0.27 -0.2 197,661 + AZOBR_RS30530 0.27 -1.2 197,661 + AZOBR_RS30530 0.27 +0.2 197,662 - AZOBR_RS30530 0.27 -0.5 197,662 - AZOBR_RS30530 0.27 +0.0 197,671 - AZOBR_RS30530 0.28 -0.6 197,877 + AZOBR_RS30530 0.43 -0.5 197,878 - AZOBR_RS30530 0.43 +0.7 197,878 - AZOBR_RS30530 0.43 +0.3 197,878 - AZOBR_RS30530 0.43 +0.6 197,914 - AZOBR_RS30530 0.46 +0.3 197,914 - AZOBR_RS30530 0.46 -0.8 197,923 - AZOBR_RS30530 0.46 +0.3 198,007 - AZOBR_RS30530 0.53 +0.2 198,007 - AZOBR_RS30530 0.53 -1.3
Or see this region's nucleotide sequence