Experiment: L-Malic (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18580 and AZOBR_RS18585 overlap by 78 nucleotides AZOBR_RS18585 and AZOBR_RS18590 are separated by 432 nucleotides
AZOBR_RS18580: AZOBR_RS18580 - uroporphyrin-III methyltransferase, at 940,308 to 941,105
_RS18580
AZOBR_RS18585: AZOBR_RS18585 - peptidase, at 941,028 to 941,819
_RS18585
AZOBR_RS18590: AZOBR_RS18590 - hypothetical protein, at 942,252 to 942,572
_RS18590
Position (kb) 941
942 Strain fitness (log2 ratio) -2
-1
0
1
2
3 at 940.833 kb on + strand, within AZOBR_RS18580 at 941.030 kb on - strand at 941.354 kb on - strand, within AZOBR_RS18585 at 941.702 kb on + strand, within AZOBR_RS18585 at 941.702 kb on + strand, within AZOBR_RS18585 at 941.702 kb on + strand, within AZOBR_RS18585 at 941.702 kb on + strand, within AZOBR_RS18585 at 941.703 kb on - strand, within AZOBR_RS18585 at 941.703 kb on - strand, within AZOBR_RS18585 at 941.703 kb on - strand, within AZOBR_RS18585 at 941.703 kb on - strand, within AZOBR_RS18585 at 941.831 kb on + strand at 942.286 kb on - strand, within AZOBR_RS18590 at 942.286 kb on - strand at 942.286 kb on - strand, within AZOBR_RS18590 at 942.286 kb on - strand, within AZOBR_RS18590 at 942.286 kb on - strand, within AZOBR_RS18590 at 942.327 kb on + strand, within AZOBR_RS18590 at 942.327 kb on + strand, within AZOBR_RS18590 at 942.327 kb on + strand, within AZOBR_RS18590 at 942.327 kb on + strand, within AZOBR_RS18590 at 942.328 kb on - strand, within AZOBR_RS18590 at 942.328 kb on - strand, within AZOBR_RS18590 at 942.465 kb on + strand, within AZOBR_RS18590 at 942.465 kb on + strand, within AZOBR_RS18590 at 942.465 kb on + strand, within AZOBR_RS18590 at 942.466 kb on - strand, within AZOBR_RS18590 at 942.466 kb on - strand, within AZOBR_RS18590 at 942.466 kb on - strand, within AZOBR_RS18590 at 942.471 kb on + strand, within AZOBR_RS18590 at 942.471 kb on + strand, within AZOBR_RS18590 at 942.471 kb on + strand, within AZOBR_RS18590 at 942.471 kb on + strand, within AZOBR_RS18590 at 942.472 kb on - strand, within AZOBR_RS18590 at 942.472 kb on - strand, within AZOBR_RS18590 at 942.712 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 8 days remove 940,833 + AZOBR_RS18580 0.66 -1.1 941,030 - +0.0 941,354 - AZOBR_RS18585 0.41 +0.2 941,702 + AZOBR_RS18585 0.85 +1.1 941,702 + AZOBR_RS18585 0.85 -1.2 941,702 + AZOBR_RS18585 0.85 +1.4 941,702 + AZOBR_RS18585 0.85 +0.9 941,703 - AZOBR_RS18585 0.85 +0.5 941,703 - AZOBR_RS18585 0.85 +1.7 941,703 - AZOBR_RS18585 0.85 +1.2 941,703 - AZOBR_RS18585 0.85 +1.7 941,831 + +0.3 942,286 - AZOBR_RS18590 0.11 +0.4 942,286 - +1.8 942,286 - AZOBR_RS18590 0.11 -0.2 942,286 - AZOBR_RS18590 0.11 -1.5 942,286 - AZOBR_RS18590 0.11 -1.9 942,327 + AZOBR_RS18590 0.23 +0.7 942,327 + AZOBR_RS18590 0.23 +0.4 942,327 + AZOBR_RS18590 0.23 -0.6 942,327 + AZOBR_RS18590 0.23 -0.6 942,328 - AZOBR_RS18590 0.24 +0.7 942,328 - AZOBR_RS18590 0.24 +0.8 942,465 + AZOBR_RS18590 0.66 -0.4 942,465 + AZOBR_RS18590 0.66 -1.8 942,465 + AZOBR_RS18590 0.66 -0.5 942,466 - AZOBR_RS18590 0.67 +1.0 942,466 - AZOBR_RS18590 0.67 -0.9 942,466 - AZOBR_RS18590 0.67 -0.0 942,471 + AZOBR_RS18590 0.68 +0.0 942,471 + AZOBR_RS18590 0.68 +0.4 942,471 + AZOBR_RS18590 0.68 +0.9 942,471 + AZOBR_RS18590 0.68 +3.0 942,472 - AZOBR_RS18590 0.69 -0.8 942,472 - AZOBR_RS18590 0.69 -0.8 942,712 + +0.5
Or see this region's nucleotide sequence