Experiment: L-Malic (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS18560 and AZOBR_RS18565 are separated by 673 nucleotides AZOBR_RS18565 and AZOBR_RS18570 are separated by 18 nucleotides
AZOBR_RS18560: AZOBR_RS18560 - ABC transporter for nitrate, periplasmic substrate-binding component <small>(from data)</small>, at 932,522 to 933,907
_RS18560
AZOBR_RS18565: AZOBR_RS18565 - Nitrite reductase (NAD(P)H) (EC 1.7.1.4) <small>(from data)</small>, at 934,581 to 937,046
_RS18565
AZOBR_RS18570: AZOBR_RS18570 - nitrite reductase, at 937,065 to 937,367
_RS18570
Position (kb) 934
935
936
937
938 Strain fitness (log2 ratio) -1
0
1
2 at 934.085 kb on - strand at 934.731 kb on + strand at 934.731 kb on + strand at 934.732 kb on - strand at 934.732 kb on - strand at 935.460 kb on + strand, within AZOBR_RS18565 at 935.461 kb on - strand, within AZOBR_RS18565 at 935.461 kb on - strand, within AZOBR_RS18565 at 935.461 kb on - strand, within AZOBR_RS18565 at 935.536 kb on - strand, within AZOBR_RS18565 at 935.733 kb on + strand, within AZOBR_RS18565 at 935.733 kb on + strand at 935.734 kb on - strand, within AZOBR_RS18565 at 935.828 kb on + strand, within AZOBR_RS18565 at 935.954 kb on + strand, within AZOBR_RS18565 at 935.954 kb on + strand, within AZOBR_RS18565 at 935.955 kb on - strand, within AZOBR_RS18565 at 936.199 kb on - strand, within AZOBR_RS18565 at 936.199 kb on - strand, within AZOBR_RS18565 at 936.199 kb on - strand, within AZOBR_RS18565 at 936.201 kb on + strand, within AZOBR_RS18565 at 936.228 kb on + strand, within AZOBR_RS18565 at 936.228 kb on + strand, within AZOBR_RS18565 at 936.229 kb on - strand, within AZOBR_RS18565 at 936.253 kb on - strand, within AZOBR_RS18565 at 936.297 kb on + strand, within AZOBR_RS18565 at 936.297 kb on + strand, within AZOBR_RS18565 at 936.297 kb on + strand, within AZOBR_RS18565 at 936.297 kb on + strand, within AZOBR_RS18565 at 936.297 kb on + strand, within AZOBR_RS18565 at 936.297 kb on + strand, within AZOBR_RS18565 at 936.701 kb on - strand, within AZOBR_RS18565 at 936.801 kb on + strand at 936.802 kb on - strand at 936.813 kb on + strand at 936.813 kb on + strand at 936.813 kb on + strand at 936.813 kb on + strand at 936.813 kb on + strand at 936.813 kb on + strand at 936.813 kb on + strand at 936.814 kb on - strand at 937.176 kb on + strand, within AZOBR_RS18570 at 937.567 kb on + strand at 937.568 kb on - strand at 937.828 kb on + strand at 937.828 kb on + strand at 937.828 kb on + strand at 937.828 kb on + strand at 937.828 kb on + strand at 937.829 kb on - strand at 937.858 kb on + strand at 937.859 kb on - strand at 937.859 kb on - strand at 937.990 kb on + strand at 937.991 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 8 days remove 934,085 - -0.4 934,731 + -1.6 934,731 + -0.8 934,732 - -1.1 934,732 - -1.1 935,460 + AZOBR_RS18565 0.36 -0.5 935,461 - AZOBR_RS18565 0.36 +0.3 935,461 - AZOBR_RS18565 0.36 +0.1 935,461 - AZOBR_RS18565 0.36 +0.4 935,536 - AZOBR_RS18565 0.39 +1.3 935,733 + AZOBR_RS18565 0.47 +1.8 935,733 + -1.6 935,734 - AZOBR_RS18565 0.47 +0.4 935,828 + AZOBR_RS18565 0.51 +0.6 935,954 + AZOBR_RS18565 0.56 +0.1 935,954 + AZOBR_RS18565 0.56 +0.7 935,955 - AZOBR_RS18565 0.56 +2.1 936,199 - AZOBR_RS18565 0.66 +0.7 936,199 - AZOBR_RS18565 0.66 +0.1 936,199 - AZOBR_RS18565 0.66 -0.0 936,201 + AZOBR_RS18565 0.66 -0.6 936,228 + AZOBR_RS18565 0.67 -0.5 936,228 + AZOBR_RS18565 0.67 +0.4 936,229 - AZOBR_RS18565 0.67 -0.1 936,253 - AZOBR_RS18565 0.68 -0.0 936,297 + AZOBR_RS18565 0.70 +0.3 936,297 + AZOBR_RS18565 0.70 -0.5 936,297 + AZOBR_RS18565 0.70 +0.8 936,297 + AZOBR_RS18565 0.70 -0.2 936,297 + AZOBR_RS18565 0.70 -0.2 936,297 + AZOBR_RS18565 0.70 +0.7 936,701 - AZOBR_RS18565 0.86 +0.1 936,801 + +0.3 936,802 - -1.3 936,813 + +0.1 936,813 + -0.1 936,813 + -1.6 936,813 + +0.0 936,813 + +0.5 936,813 + -0.8 936,813 + +0.3 936,814 - +0.1 937,176 + AZOBR_RS18570 0.37 +0.3 937,567 + -0.0 937,568 - +0.4 937,828 + +0.5 937,828 + +0.3 937,828 + +2.4 937,828 + +1.2 937,828 + +1.1 937,829 - -0.1 937,858 + +0.2 937,859 - -0.7 937,859 - -0.3 937,990 + -0.2 937,991 - +0.7
Or see this region's nucleotide sequence