Experiment: L-Malic (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS08685 and AZOBR_RS08690 overlap by 25 nucleotides AZOBR_RS08690 and AZOBR_RS08695 overlap by 4 nucleotides AZOBR_RS08695 and AZOBR_RS08700 are separated by 55 nucleotides AZOBR_RS08700 and AZOBR_RS08705 are separated by 16 nucleotides
AZOBR_RS08685: AZOBR_RS08685 - GNAT family acetyltransferase, at 1,818,742 to 1,819,383
_RS08685
AZOBR_RS08690: AZOBR_RS08690 - acetyltransferase, at 1,819,359 to 1,819,793
_RS08690
AZOBR_RS08695: AZOBR_RS08695 - 3-mercaptopyruvate sulfurtransferase, at 1,819,790 to 1,820,653
_RS08695
AZOBR_RS08700: AZOBR_RS08700 - Ala-tRNA(Pro) hydrolase, at 1,820,709 to 1,821,416
_RS08700
AZOBR_RS08705: AZOBR_RS08705 - cysteine synthase, at 1,821,433 to 1,822,437
_RS08705
Position (kb)
1819
1820
1821 Strain fitness (log2 ratio)
-1
0
1 at 1818.998 kb on + strand, within AZOBR_RS08685 at 1818.999 kb on - strand, within AZOBR_RS08685 at 1819.065 kb on - strand, within AZOBR_RS08685 at 1819.065 kb on - strand, within AZOBR_RS08685 at 1819.065 kb on - strand, within AZOBR_RS08685 at 1819.065 kb on - strand, within AZOBR_RS08685 at 1819.065 kb on - strand, within AZOBR_RS08685 at 1819.170 kb on - strand, within AZOBR_RS08685 at 1819.170 kb on - strand, within AZOBR_RS08685 at 1819.182 kb on - strand, within AZOBR_RS08685 at 1819.182 kb on - strand, within AZOBR_RS08685 at 1819.184 kb on + strand, within AZOBR_RS08685 at 1819.185 kb on - strand, within AZOBR_RS08685 at 1819.277 kb on + strand, within AZOBR_RS08685 at 1819.277 kb on + strand, within AZOBR_RS08685 at 1819.429 kb on + strand, within AZOBR_RS08690 at 1819.570 kb on + strand, within AZOBR_RS08690 at 1819.571 kb on - strand, within AZOBR_RS08690 at 1819.573 kb on + strand, within AZOBR_RS08690 at 1819.573 kb on + strand, within AZOBR_RS08690 at 1819.573 kb on + strand, within AZOBR_RS08690 at 1819.574 kb on - strand, within AZOBR_RS08690 at 1819.765 kb on + strand at 1819.765 kb on + strand at 1819.766 kb on - strand at 1819.875 kb on + strand at 1819.875 kb on + strand at 1819.876 kb on - strand at 1820.127 kb on + strand, within AZOBR_RS08695 at 1820.391 kb on + strand, within AZOBR_RS08695 at 1820.391 kb on + strand, within AZOBR_RS08695 at 1820.392 kb on - strand, within AZOBR_RS08695 at 1820.392 kb on - strand, within AZOBR_RS08695 at 1820.392 kb on - strand, within AZOBR_RS08695 at 1820.674 kb on + strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1820.675 kb on - strand at 1821.316 kb on + strand, within AZOBR_RS08700
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 8 days remove 1,818,998 + AZOBR_RS08685 0.40 -0.2 1,818,999 - AZOBR_RS08685 0.40 +0.2 1,819,065 - AZOBR_RS08685 0.50 +0.3 1,819,065 - AZOBR_RS08685 0.50 +0.3 1,819,065 - AZOBR_RS08685 0.50 +0.1 1,819,065 - AZOBR_RS08685 0.50 -1.1 1,819,065 - AZOBR_RS08685 0.50 -0.2 1,819,170 - AZOBR_RS08685 0.67 +0.6 1,819,170 - AZOBR_RS08685 0.67 -1.0 1,819,182 - AZOBR_RS08685 0.69 +0.3 1,819,182 - AZOBR_RS08685 0.69 +0.5 1,819,184 + AZOBR_RS08685 0.69 -0.1 1,819,185 - AZOBR_RS08685 0.69 +0.1 1,819,277 + AZOBR_RS08685 0.83 -1.5 1,819,277 + AZOBR_RS08685 0.83 +0.2 1,819,429 + AZOBR_RS08690 0.16 +0.5 1,819,570 + AZOBR_RS08690 0.49 -0.1 1,819,571 - AZOBR_RS08690 0.49 -0.4 1,819,573 + AZOBR_RS08690 0.49 +0.6 1,819,573 + AZOBR_RS08690 0.49 +0.7 1,819,573 + AZOBR_RS08690 0.49 -1.1 1,819,574 - AZOBR_RS08690 0.49 -0.2 1,819,765 + +0.8 1,819,765 + +0.3 1,819,766 - +0.0 1,819,875 + +0.5 1,819,875 + -0.2 1,819,876 - +0.5 1,820,127 + AZOBR_RS08695 0.39 +0.4 1,820,391 + AZOBR_RS08695 0.70 -1.7 1,820,391 + AZOBR_RS08695 0.70 +0.7 1,820,392 - AZOBR_RS08695 0.70 +0.3 1,820,392 - AZOBR_RS08695 0.70 +0.2 1,820,392 - AZOBR_RS08695 0.70 +0.4 1,820,674 + +0.6 1,820,675 - -0.4 1,820,675 - -0.3 1,820,675 - +0.7 1,820,675 - +0.7 1,820,675 - +0.3 1,820,675 - +0.6 1,821,316 + AZOBR_RS08700 0.86 +0.7
Or see this region's nucleotide sequence