Experiment: L-Malic (C) with ammonium chloride; anaerobic; 8 days
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt AZOBR_RS07855 and AZOBR_RS07860 are separated by 167 nucleotides
AZOBR_RS07855: AZOBR_RS07855 - hypothetical protein, at 1,655,378 to 1,656,382
_RS07855
AZOBR_RS07860: AZOBR_RS07860 - hypothetical protein, at 1,656,550 to 1,656,921
_RS07860
Position (kb)
1656
1657 Strain fitness (log2 ratio)
-2
-1
0
1 at 1655.589 kb on + strand, within AZOBR_RS07855 at 1655.589 kb on + strand, within AZOBR_RS07855 at 1655.590 kb on - strand, within AZOBR_RS07855 at 1655.678 kb on + strand, within AZOBR_RS07855 at 1655.678 kb on + strand, within AZOBR_RS07855 at 1655.679 kb on - strand, within AZOBR_RS07855 at 1655.679 kb on - strand, within AZOBR_RS07855 at 1655.679 kb on - strand, within AZOBR_RS07855 at 1655.679 kb on - strand, within AZOBR_RS07855 at 1655.933 kb on + strand, within AZOBR_RS07855 at 1655.933 kb on + strand, within AZOBR_RS07855 at 1655.934 kb on - strand, within AZOBR_RS07855 at 1655.934 kb on - strand, within AZOBR_RS07855 at 1655.976 kb on + strand, within AZOBR_RS07855 at 1655.977 kb on - strand, within AZOBR_RS07855 at 1656.137 kb on + strand, within AZOBR_RS07855 at 1656.137 kb on + strand, within AZOBR_RS07855 at 1656.138 kb on - strand, within AZOBR_RS07855 at 1656.138 kb on - strand, within AZOBR_RS07855 at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.318 kb on + strand at 1656.319 kb on - strand at 1656.319 kb on - strand at 1656.319 kb on - strand at 1656.380 kb on + strand at 1656.380 kb on + strand at 1656.437 kb on - strand at 1656.513 kb on + strand at 1656.572 kb on + strand at 1656.930 kb on + strand at 1656.931 kb on - strand at 1656.963 kb on + strand at 1656.964 kb on - strand at 1657.218 kb on + strand at 1657.218 kb on + strand at 1657.218 kb on + strand at 1657.219 kb on - strand at 1657.219 kb on - strand at 1657.336 kb on + strand at 1657.511 kb on + strand at 1657.512 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Malic (C) with ammonium chloride; anaerobic; 8 days remove 1,655,589 + AZOBR_RS07855 0.21 -0.3 1,655,589 + AZOBR_RS07855 0.21 -0.1 1,655,590 - AZOBR_RS07855 0.21 +0.7 1,655,678 + AZOBR_RS07855 0.30 +0.5 1,655,678 + AZOBR_RS07855 0.30 +1.5 1,655,679 - AZOBR_RS07855 0.30 -0.3 1,655,679 - AZOBR_RS07855 0.30 +0.3 1,655,679 - AZOBR_RS07855 0.30 +0.6 1,655,679 - AZOBR_RS07855 0.30 -2.5 1,655,933 + AZOBR_RS07855 0.55 +0.3 1,655,933 + AZOBR_RS07855 0.55 -0.1 1,655,934 - AZOBR_RS07855 0.55 +0.1 1,655,934 - AZOBR_RS07855 0.55 +0.7 1,655,976 + AZOBR_RS07855 0.60 +0.7 1,655,977 - AZOBR_RS07855 0.60 +0.6 1,656,137 + AZOBR_RS07855 0.76 +0.7 1,656,137 + AZOBR_RS07855 0.76 +0.2 1,656,138 - AZOBR_RS07855 0.76 +0.3 1,656,138 - AZOBR_RS07855 0.76 -0.1 1,656,318 + +0.9 1,656,318 + +0.4 1,656,318 + +0.4 1,656,318 + -0.5 1,656,318 + +0.3 1,656,318 + +0.6 1,656,319 - +0.9 1,656,319 - +0.2 1,656,319 - -0.3 1,656,380 + +0.7 1,656,380 + -0.2 1,656,437 - +0.4 1,656,513 + -1.6 1,656,572 + -1.1 1,656,930 + +0.4 1,656,931 - -0.3 1,656,963 + -0.4 1,656,964 - -0.0 1,657,218 + +0.5 1,657,218 + +0.7 1,657,218 + +0.5 1,657,219 - +0.2 1,657,219 - +0.1 1,657,336 + +1.1 1,657,511 + -1.0 1,657,512 - -0.1
Or see this region's nucleotide sequence