Strain Fitness in Bacteroides thetaiotaomicron VPI-5482 around BT1683

Experiment: L-Valine (N)

Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

Per-strain Table

Position	Strand	Gene	LocusTag	Fraction	L-Valine (N)
2,074,905	-		BT1682	0.51	-0.1
2,074,921	+		BT1682	0.52	+0.9
2,074,924	-		BT1682	0.52	-0.9
2,074,975	+		BT1682	0.55	-0.3
2,074,986	+		BT1682	0.56	-0.1
2,075,042	-		BT1682	0.58	-0.6
2,075,042	-		BT1682	0.58	+0.7
2,075,064	-		BT1682	0.60	+0.8
2,075,089	-		BT1682	0.61	-0.8
2,075,114	-		BT1682	0.62	-0.9
2,075,136	+		BT1682	0.63	-2.1
2,075,194	+		BT1682	0.66	-1.5
2,075,199	+		BT1682	0.66	-3.1
2,075,200	-		BT1682	0.67	-0.5
2,075,250	+		BT1682	0.69	-0.3
2,075,250	+		BT1682	0.69	-0.2
2,075,251	-		BT1682	0.69	-1.7
2,075,251	-		BT1682	0.69	+0.5
2,075,279	+		BT1682	0.71	-0.1
2,075,330	-		BT1682	0.73	+1.5
2,075,418	+		BT1682	0.78	-2.4
2,075,418	+		BT1682	0.78	-0.9
2,075,424	+		BT1682	0.78	-3.6
2,075,425	-		BT1682	0.78	-0.6
2,075,512	+		BT1682	0.82	-0.6
2,075,525	-		BT1682	0.83	+0.8
2,075,532	+		BT1682	0.83	+0.8
2,075,532	+		BT1682	0.83	-0.6
2,075,533	-		BT1682	0.84	-0.3
2,075,551	+		BT1682	0.84	-1.7
2,075,563	+		BT1682	0.85	+0.4
2,075,587	-		BT1682	0.86	-1.8
2,075,590	+		BT1682	0.86	-0.7
2,075,595	+		BT1682	0.87	-1.5
2,075,680	-				-2.1
2,075,703	+				-0.9
2,075,725	+				-0.2
2,075,725	+				+0.4
2,075,740	+				-0.8
2,075,741	-				-0.3
2,075,741	-				+0.7
2,075,839	+				+0.7
2,075,840	-				-0.8
2,075,840	-				-0.9
2,075,841	+				-1.1
2,075,843	+				+0.5
2,075,844	-				-1.1
2,075,973	+				+3.5
2,076,030	+				-0.5
2,076,030	+				-2.1
2,076,048	+				-0.9
2,076,049	-				-0.5
2,076,095	+				-1.3
2,076,099	-				+0.0
2,076,099	-				-1.1
2,076,147	+				-0.2
2,076,191	+		BT1683	0.10	-0.8
2,076,191	+		BT1683	0.10	-0.4
2,076,213	+		BT1683	0.11	+0.5
2,076,236	+		BT1683	0.12	-0.6
2,076,258	-		BT1683	0.12	-1.9
2,076,324	+		BT1683	0.14	-0.8
2,076,331	-		BT1683	0.15	-0.3
2,076,357	+		BT1683	0.15	-0.3
2,076,381	-		BT1683	0.16	-0.5
2,076,414	+		BT1683	0.17	-1.9
2,076,446	+		BT1683	0.18	+0.3
2,076,449	+		BT1683	0.18	-1.8
2,076,449	+		BT1683	0.18	-1.3
2,076,481	+		BT1683	0.19	-2.1
2,076,492	+		BT1683	0.20	-0.3
2,076,564	+		BT1683	0.22	-0.9
2,076,735	+		BT1683	0.27	-1.3
2,076,795	+		BT1683	0.29	+0.5
2,076,822	+		BT1683	0.30	-0.5
2,076,822	+		BT1683	0.30	-0.1
2,076,972	+		BT1683	0.35	-0.1
2,077,093	+		BT1683	0.38	-0.5
2,077,137	+		BT1683	0.40	+0.9
2,077,138	-		BT1683	0.40	+0.2
2,077,165	+		BT1683	0.41	-0.1
2,077,165	+		BT1683	0.41	-0.5
2,077,194	+		BT1683	0.42	+2.5
2,077,254	+		BT1683	0.43	+0.1
2,077,255	-		BT1683	0.43	-1.8
2,077,263	-		BT1683	0.44	-1.9
2,077,263	-		BT1683	0.44	-1.1
2,077,330	-		BT1683	0.46	+2.8
2,077,416	-		BT1683	0.49	+0.5
2,077,461	+		BT1683	0.50	-0.1
2,077,480	+		BT1683	0.51	-1.8
2,077,481	-		BT1683	0.51	+0.9
2,077,483	+		BT1683	0.51	+0.3
2,077,500	-		BT1683	0.51	-2.1
2,077,515	+		BT1683	0.52	+0.5
2,077,560	+		BT1683	0.53	-2.5
2,077,563	-		BT1683	0.53	-0.0
2,077,674	-		BT1683	0.57	-0.6
2,077,695	+		BT1683	0.57	-1.8
2,077,696	-		BT1683	0.57	+2.9
2,077,702	-		BT1683	0.57	-0.3
2,077,703	+		BT1683	0.57	-0.0
2,077,788	+		BT1683	0.60	-2.2
2,077,791	-		BT1683	0.60	-0.5
2,077,840	-		BT1683	0.62	+2.7
2,077,915	-		BT1683	0.64	-0.1
2,077,931	+		BT1683	0.65	-1.6
2,077,932	-		BT1683	0.65	+0.9
2,077,932	-		BT1683	0.65	-0.9
2,077,939	-		BT1683	0.65	-1.6
2,077,940	+		BT1683	0.65	-0.8
2,077,959	+		BT1683	0.66	+0.5
2,077,959	+		BT1683	0.66	-0.8
2,077,976	+		BT1683	0.66	-0.7
2,078,010	+		BT1683	0.67	-1.3
2,078,011	-		BT1683	0.67	-0.1
2,078,028	+		BT1683	0.68	-1.1
2,078,028	+		BT1683	0.68	-0.5
2,078,032	-		BT1683	0.68	-2.7
2,078,034	-		BT1683	0.68	-2.0
2,078,057	-		BT1683	0.69	-0.7
2,078,105	+		BT1683	0.70	-0.9
2,078,151	+		BT1683	0.72	-0.9
2,078,164	+		BT1683	0.72	-1.6
2,078,173	-		BT1683	0.72	+0.0
2,078,200	-		BT1683	0.73	-1.4
2,078,200	-		BT1683	0.73	-0.8
2,078,315	+		BT1683	0.77	-0.5
2,078,320	-		BT1683	0.77	-0.9
2,078,320	-		BT1683	0.77	+0.2
2,078,326	-		BT1683	0.77	-0.5
2,078,344	+				-1.3
2,078,352	+		BT1683	0.78	-1.1
2,078,385	+		BT1683	0.79	-0.9
2,078,385	+		BT1683	0.79	-0.1
2,078,398	-		BT1683	0.79	-0.4
2,078,407	-		BT1683	0.80	+1.5
2,078,439	+		BT1683	0.81	-0.8
2,078,442	+		BT1683	0.81	+0.5
2,078,461	+		BT1683	0.81	+0.5
2,078,662	+		BT1683	0.88	+0.1
2,078,662	+		BT1683	0.88	-0.8
2,078,803	-				-1.3
2,078,818	+				-2.6
2,078,830	-				-2.3
2,078,830	-				-1.6
2,078,850	+				+1.4
2,078,851	-				-0.6
2,078,931	+				-1.1
2,078,931	+				-1.1
2,078,932	-				-0.8
2,078,987	-				-0.7
2,079,102	+				+0.4
2,079,154	-				-0.5
2,079,172	+				-1.9
2,079,318	-				+0.3
2,079,331	-				-1.3
2,079,331	-				+1.5
2,079,331	-				-2.9
2,079,331	-				-1.6
2,079,422	+		BT1684	0.11	-1.5
2,079,422	+		BT1684	0.11	-0.5
2,079,423	-		BT1684	0.11	-0.1
2,079,535	+		BT1684	0.23	-2.2
2,079,536	-		BT1684	0.23	-1.1
2,079,653	+		BT1684	0.34	-1.1
2,079,835	+		BT1684	0.53	-1.1
2,079,839	-		BT1684	0.53	-2.1
2,079,959	+		BT1684	0.65	-0.3
2,079,960	-		BT1684	0.65	-3.1
2,079,960	-		BT1684	0.65	-1.3
2,079,996	+		BT1684	0.69	-1.1