Experiment: L-Valine (N)
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt BT0800 and BT0801 are separated by 31 nucleotides BT0801 and BT0802 are separated by 29 nucleotides BT0802 and BT0803 overlap by 16 nucleotides
BT0800: BT0800 - conserved hypothetical protein (NCBI ptt file), at 989,534 to 990,241
BT0800
BT0801: BT0801 - arsenical resistance operon trans-acting repressor (NCBI ptt file), at 990,273 to 990,599
BT0801
BT0802: BT0802 - arsenical pump-driving ATPase (NCBI ptt file), at 990,629 to 992,341
BT0802
BT0803: BT0803 - integral membrane efflux pump, putative multidrug-efflux transporter (NCBI ptt file), at 992,326 to 993,384
BT0803
Position (kb) 990
991
992
993 Strain fitness (log2 ratio) -3
-2
-1
0
1
2 at 989.695 kb on - strand, within BT0800 at 989.711 kb on - strand, within BT0800 at 989.733 kb on - strand, within BT0800 at 989.735 kb on - strand, within BT0800 at 989.739 kb on + strand, within BT0800 at 989.783 kb on - strand, within BT0800 at 989.787 kb on - strand, within BT0800 at 989.788 kb on + strand, within BT0800 at 989.810 kb on - strand, within BT0800 at 989.881 kb on - strand, within BT0800 at 990.017 kb on - strand, within BT0800 at 990.063 kb on + strand, within BT0800 at 990.064 kb on - strand, within BT0800 at 990.065 kb on + strand, within BT0800 at 990.066 kb on - strand, within BT0800 at 990.117 kb on - strand, within BT0800 at 990.202 kb on - strand at 990.208 kb on - strand at 990.436 kb on - strand, within BT0801 at 990.436 kb on - strand, within BT0801 at 990.598 kb on - strand at 990.603 kb on + strand at 990.894 kb on - strand, within BT0802 at 991.054 kb on + strand, within BT0802 at 991.055 kb on - strand, within BT0802 at 991.085 kb on - strand, within BT0802 at 991.120 kb on + strand, within BT0802 at 991.127 kb on - strand, within BT0802 at 991.342 kb on - strand, within BT0802 at 991.342 kb on - strand, within BT0802 at 991.397 kb on - strand at 991.454 kb on + strand, within BT0802 at 991.489 kb on + strand, within BT0802 at 991.500 kb on + strand, within BT0802 at 991.508 kb on - strand, within BT0802 at 991.538 kb on - strand, within BT0802 at 991.668 kb on + strand, within BT0802 at 991.766 kb on - strand, within BT0802 at 991.862 kb on + strand, within BT0802 at 991.863 kb on - strand, within BT0802 at 992.117 kb on - strand, within BT0802 at 992.117 kb on - strand, within BT0802 at 992.597 kb on + strand, within BT0803 at 992.627 kb on - strand, within BT0803 at 992.627 kb on - strand, within BT0803 at 992.627 kb on - strand, within BT0803 at 992.631 kb on - strand, within BT0803 at 992.657 kb on + strand, within BT0803 at 992.688 kb on - strand, within BT0803 at 992.703 kb on - strand, within BT0803 at 992.722 kb on - strand, within BT0803 at 992.732 kb on + strand, within BT0803 at 992.895 kb on - strand, within BT0803 at 993.004 kb on + strand, within BT0803 at 993.027 kb on - strand, within BT0803 at 993.142 kb on + strand, within BT0803 at 993.180 kb on - strand, within BT0803 at 993.312 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction L-Valine (N) remove 989,695 - BT0800 0.23 +0.0 989,711 - BT0800 0.25 -1.4 989,733 - BT0800 0.28 +0.6 989,735 - BT0800 0.28 -1.5 989,739 + BT0800 0.29 +1.0 989,783 - BT0800 0.35 +0.0 989,787 - BT0800 0.36 -1.5 989,788 + BT0800 0.36 -0.4 989,810 - BT0800 0.39 -1.7 989,881 - BT0800 0.49 -2.3 990,017 - BT0800 0.68 +0.2 990,063 + BT0800 0.75 -0.7 990,064 - BT0800 0.75 -1.0 990,065 + BT0800 0.75 -0.7 990,066 - BT0800 0.75 -1.2 990,117 - BT0800 0.82 -0.4 990,202 - -1.5 990,208 - -1.4 990,436 - BT0801 0.50 -1.0 990,436 - BT0801 0.50 +0.0 990,598 - -0.2 990,603 + -1.4 990,894 - BT0802 0.15 +1.3 991,054 + BT0802 0.25 +0.0 991,055 - BT0802 0.25 +1.6 991,085 - BT0802 0.27 -1.5 991,120 + BT0802 0.29 -3.2 991,127 - BT0802 0.29 -1.2 991,342 - BT0802 0.42 -1.5 991,342 - BT0802 0.42 +0.6 991,397 - +1.0 991,454 + BT0802 0.48 -0.4 991,489 + BT0802 0.50 -0.7 991,500 + BT0802 0.51 -2.5 991,508 - BT0802 0.51 +1.6 991,538 - BT0802 0.53 -1.0 991,668 + BT0802 0.61 +0.0 991,766 - BT0802 0.66 +0.0 991,862 + BT0802 0.72 +0.9 991,863 - BT0802 0.72 -0.4 992,117 - BT0802 0.87 -2.2 992,117 - BT0802 0.87 -0.5 992,597 + BT0803 0.26 +0.1 992,627 - BT0803 0.28 -1.3 992,627 - BT0803 0.28 -0.9 992,627 - BT0803 0.28 -0.4 992,631 - BT0803 0.29 +2.6 992,657 + BT0803 0.31 +0.2 992,688 - BT0803 0.34 -0.2 992,703 - BT0803 0.36 +0.6 992,722 - BT0803 0.37 -0.7 992,732 + BT0803 0.38 -1.4 992,895 - BT0803 0.54 -0.9 993,004 + BT0803 0.64 +0.6 993,027 - BT0803 0.66 -1.1 993,142 + BT0803 0.77 -0.3 993,180 - BT0803 0.81 +2.2 993,312 + +0.1
Or see this region's nucleotide sequence