Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3458 and Dsui_3459 are separated by 46 nucleotides Dsui_3459 and Dsui_3460 are separated by 1 nucleotides Dsui_3460 and Dsui_3461 are separated by 150 nucleotides
Dsui_3458: Dsui_3458 - septum site-determining protein MinC, at 3,721,228 to 3,722,064
_3458
Dsui_3459: Dsui_3459 - septum site-determining protein MinD, at 3,722,111 to 3,722,923
_3459
Dsui_3460: Dsui_3460 - cell division topological specificity factor MinE, at 3,722,925 to 3,723,191
_3460
Dsui_3461: Dsui_3461 - hypothetical protein, at 3,723,342 to 3,724,892
_3461
Position (kb)
3722
3723 Strain fitness (log2 ratio)
-5
-4
-3
-2
-1
0
1 at 3721.173 kb on + strand at 3721.181 kb on - strand at 3721.233 kb on - strand at 3721.502 kb on - strand, within Dsui_3458 at 3721.636 kb on + strand, within Dsui_3458 at 3721.770 kb on + strand, within Dsui_3458 at 3721.827 kb on + strand, within Dsui_3458 at 3721.874 kb on - strand at 3721.967 kb on + strand, within Dsui_3458 at 3722.050 kb on + strand at 3722.057 kb on - strand at 3722.057 kb on - strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.083 kb on + strand at 3722.091 kb on - strand at 3722.091 kb on - strand at 3722.184 kb on + strand at 3722.186 kb on - strand at 3722.192 kb on - strand at 3722.241 kb on + strand, within Dsui_3459 at 3722.241 kb on + strand, within Dsui_3459 at 3722.249 kb on - strand at 3722.346 kb on + strand, within Dsui_3459 at 3722.444 kb on + strand, within Dsui_3459 at 3722.590 kb on + strand, within Dsui_3459 at 3722.649 kb on + strand, within Dsui_3459 at 3722.649 kb on - strand at 3722.691 kb on + strand, within Dsui_3459 at 3722.766 kb on + strand, within Dsui_3459 at 3722.861 kb on + strand at 3723.247 kb on + strand at 3723.459 kb on - strand at 3723.759 kb on + strand at 3723.831 kb on + strand, within Dsui_3461 at 3723.884 kb on + strand, within Dsui_3461 at 3723.908 kb on + strand at 3723.913 kb on + strand at 3723.921 kb on - strand, within Dsui_3461
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 3,721,173 + -1.9 3,721,181 - -1.1 3,721,233 - -2.6 3,721,502 - Dsui_3458 0.33 -0.3 3,721,636 + Dsui_3458 0.49 -2.7 3,721,770 + Dsui_3458 0.65 -2.9 3,721,827 + Dsui_3458 0.72 -3.6 3,721,874 - +0.7 3,721,967 + Dsui_3458 0.88 -2.1 3,722,050 + -2.3 3,722,057 - -1.3 3,722,057 - +0.7 3,722,083 + -1.8 3,722,083 + -2.0 3,722,083 + -3.0 3,722,083 + -2.1 3,722,091 - +0.7 3,722,091 - +0.7 3,722,184 + -2.6 3,722,186 - +0.7 3,722,192 - -1.3 3,722,241 + Dsui_3459 0.16 -3.9 3,722,241 + Dsui_3459 0.16 -2.9 3,722,249 - +0.7 3,722,346 + Dsui_3459 0.29 -2.4 3,722,444 + Dsui_3459 0.41 -2.9 3,722,590 + Dsui_3459 0.59 -3.7 3,722,649 + Dsui_3459 0.66 -5.3 3,722,649 - +0.7 3,722,691 + Dsui_3459 0.71 -3.3 3,722,766 + Dsui_3459 0.81 -2.6 3,722,861 + -3.2 3,723,247 + -1.3 3,723,459 - -1.3 3,723,759 + +0.7 3,723,831 + Dsui_3461 0.32 -0.3 3,723,884 + Dsui_3461 0.35 -0.9 3,723,908 + -1.3 3,723,913 + -0.3 3,723,921 - Dsui_3461 0.37 -0.9
Or see this region's nucleotide sequence