Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3447 and Dsui_3448 overlap by 1 nucleotides Dsui_3448 and Dsui_3449 are separated by 66 nucleotides
Dsui_3447: Dsui_3447 - signal transduction histidine kinase, at 3,706,188 to 3,707,558
_3447
Dsui_3448: Dsui_3448 - response regulator with CheY-like receiver domain and winged-helix DNA-binding domain, at 3,707,558 to 3,708,256
_3448
Dsui_3449: Dsui_3449 - PAS domain S-box/diguanylate cyclase (GGDEF) domain-containing protein, at 3,708,323 to 3,710,467
_3449
Position (kb)
3707
3708
3709 Strain fitness (log2 ratio)
-2
-1
0
1 at 3706.848 kb on + strand at 3706.958 kb on - strand at 3707.138 kb on - strand, within Dsui_3447 at 3707.399 kb on + strand at 3707.400 kb on - strand, within Dsui_3447 at 3707.432 kb on + strand at 3707.475 kb on + strand at 3707.633 kb on - strand, within Dsui_3448 at 3707.635 kb on + strand at 3707.824 kb on - strand, within Dsui_3448 at 3707.907 kb on - strand, within Dsui_3448 at 3708.043 kb on - strand, within Dsui_3448 at 3708.103 kb on - strand, within Dsui_3448 at 3708.134 kb on + strand at 3708.137 kb on - strand, within Dsui_3448 at 3708.234 kb on - strand at 3708.266 kb on - strand at 3708.266 kb on - strand at 3708.339 kb on - strand at 3708.667 kb on + strand, within Dsui_3449 at 3708.726 kb on - strand, within Dsui_3449 at 3709.049 kb on - strand at 3709.183 kb on + strand, within Dsui_3449 at 3709.209 kb on + strand, within Dsui_3449 at 3709.223 kb on - strand, within Dsui_3449 at 3709.256 kb on + strand, within Dsui_3449
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 3,706,848 + -0.9 3,706,958 - +0.7 3,707,138 - Dsui_3447 0.69 +0.7 3,707,399 + +0.7 3,707,400 - Dsui_3447 0.88 -0.9 3,707,432 + +0.7 3,707,475 + -0.3 3,707,633 - Dsui_3448 0.11 +0.7 3,707,635 + -0.9 3,707,824 - Dsui_3448 0.38 -1.9 3,707,907 - Dsui_3448 0.50 -1.3 3,708,043 - Dsui_3448 0.69 -0.3 3,708,103 - Dsui_3448 0.78 -2.5 3,708,134 + -0.3 3,708,137 - Dsui_3448 0.83 -0.3 3,708,234 - -0.3 3,708,266 - +0.7 3,708,266 - -0.3 3,708,339 - -0.9 3,708,667 + Dsui_3449 0.16 -0.2 3,708,726 - Dsui_3449 0.19 -0.9 3,709,049 - +0.7 3,709,183 + Dsui_3449 0.40 -0.2 3,709,209 + Dsui_3449 0.41 -0.0 3,709,223 - Dsui_3449 0.42 -0.3 3,709,256 + Dsui_3449 0.43 -0.1
Or see this region's nucleotide sequence