Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3445 and Dsui_3446 overlap by 1 nucleotides Dsui_3446 and Dsui_3447 are separated by 228 nucleotides
Dsui_3445: Dsui_3445 - hypothetical protein, at 3,703,405 to 3,705,051
_3445
Dsui_3446: Dsui_3446 - 4-hydroxybenzoate polyprenyltransferase-like prenyltransferase, at 3,705,051 to 3,705,959
_3446
Dsui_3447: Dsui_3447 - signal transduction histidine kinase, at 3,706,188 to 3,707,558
_3447
Position (kb)
3705
3706 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3704.100 kb on + strand, within Dsui_3445 at 3704.118 kb on + strand, within Dsui_3445 at 3704.118 kb on + strand, within Dsui_3445 at 3704.126 kb on - strand, within Dsui_3445 at 3704.256 kb on - strand, within Dsui_3445 at 3704.487 kb on - strand, within Dsui_3445 at 3704.615 kb on + strand, within Dsui_3445 at 3704.615 kb on + strand, within Dsui_3445 at 3704.615 kb on + strand, within Dsui_3445 at 3704.642 kb on - strand, within Dsui_3445 at 3704.695 kb on - strand, within Dsui_3445 at 3704.697 kb on + strand, within Dsui_3445 at 3704.759 kb on + strand, within Dsui_3445 at 3704.801 kb on + strand, within Dsui_3445 at 3704.807 kb on - strand, within Dsui_3445 at 3704.913 kb on - strand at 3704.918 kb on + strand at 3705.146 kb on - strand, within Dsui_3446 at 3705.230 kb on - strand, within Dsui_3446 at 3705.237 kb on - strand, within Dsui_3446 at 3705.541 kb on + strand, within Dsui_3446 at 3705.661 kb on + strand, within Dsui_3446 at 3705.715 kb on - strand, within Dsui_3446 at 3705.750 kb on - strand, within Dsui_3446 at 3706.015 kb on + strand at 3706.035 kb on + strand at 3706.053 kb on - strand at 3706.104 kb on - strand at 3706.259 kb on + strand at 3706.264 kb on + strand at 3706.848 kb on + strand at 3706.958 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 3,704,100 + Dsui_3445 0.42 -0.9 3,704,118 + Dsui_3445 0.43 -0.8 3,704,118 + Dsui_3445 0.43 +0.9 3,704,126 - Dsui_3445 0.44 -0.3 3,704,256 - Dsui_3445 0.52 +0.7 3,704,487 - Dsui_3445 0.66 -2.9 3,704,615 + Dsui_3445 0.73 +0.1 3,704,615 + Dsui_3445 0.73 +0.0 3,704,615 + Dsui_3445 0.73 +0.3 3,704,642 - Dsui_3445 0.75 -0.3 3,704,695 - Dsui_3445 0.78 -0.3 3,704,697 + Dsui_3445 0.78 +0.8 3,704,759 + Dsui_3445 0.82 +0.2 3,704,801 + Dsui_3445 0.85 -0.5 3,704,807 - Dsui_3445 0.85 -0.3 3,704,913 - -0.9 3,704,918 + +0.1 3,705,146 - Dsui_3446 0.10 +0.7 3,705,230 - Dsui_3446 0.20 -0.3 3,705,237 - Dsui_3446 0.20 +0.7 3,705,541 + Dsui_3446 0.54 +0.9 3,705,661 + Dsui_3446 0.67 +0.5 3,705,715 - Dsui_3446 0.73 -0.3 3,705,750 - Dsui_3446 0.77 -0.3 3,706,015 + -0.4 3,706,035 + +0.2 3,706,053 - -1.3 3,706,104 - +0.7 3,706,259 + -0.9 3,706,264 + -1.9 3,706,848 + -0.9 3,706,958 - +0.7
Or see this region's nucleotide sequence