Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3156 and Dsui_3157 are separated by 187 nucleotides Dsui_3157 and Dsui_3158 are separated by 78 nucleotides
Dsui_3156: Dsui_3156 - putative permease, at 3,378,540 to 3,379,313
_3156
Dsui_3157: Dsui_3157 - Fatty acid cis/trans isomerase (CTI), at 3,379,501 to 3,381,852
_3157
Dsui_3158: Dsui_3158 - Na+/H+ dicarboxylate symporter, at 3,381,931 to 3,383,277
_3158
Position (kb)
3379
3380
3381
3382 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 3378.806 kb on - strand, within Dsui_3156 at 3378.892 kb on + strand, within Dsui_3156 at 3378.927 kb on - strand, within Dsui_3156 at 3378.946 kb on + strand, within Dsui_3156 at 3379.059 kb on + strand, within Dsui_3156 at 3379.065 kb on - strand, within Dsui_3156 at 3379.162 kb on + strand, within Dsui_3156 at 3379.170 kb on - strand at 3379.173 kb on - strand, within Dsui_3156 at 3379.186 kb on + strand, within Dsui_3156 at 3379.270 kb on - strand at 3379.293 kb on + strand at 3379.395 kb on + strand at 3379.463 kb on + strand at 3379.463 kb on + strand at 3379.480 kb on + strand at 3379.480 kb on + strand at 3379.733 kb on + strand at 3379.906 kb on + strand, within Dsui_3157 at 3380.159 kb on - strand, within Dsui_3157 at 3380.256 kb on - strand, within Dsui_3157 at 3380.261 kb on - strand at 3380.516 kb on + strand, within Dsui_3157 at 3380.538 kb on - strand, within Dsui_3157 at 3380.782 kb on - strand at 3380.870 kb on - strand at 3380.876 kb on + strand, within Dsui_3157 at 3380.915 kb on - strand, within Dsui_3157 at 3381.034 kb on + strand, within Dsui_3157 at 3381.168 kb on + strand, within Dsui_3157 at 3381.432 kb on + strand, within Dsui_3157 at 3381.453 kb on - strand at 3381.480 kb on + strand, within Dsui_3157 at 3381.583 kb on + strand, within Dsui_3157 at 3381.601 kb on - strand, within Dsui_3157 at 3381.678 kb on + strand at 3381.728 kb on + strand at 3381.728 kb on + strand at 3381.728 kb on + strand at 3381.728 kb on + strand at 3381.736 kb on - strand at 3381.736 kb on - strand at 3381.802 kb on + strand at 3381.834 kb on - strand at 3381.834 kb on - strand at 3381.926 kb on - strand at 3381.992 kb on + strand at 3381.993 kb on - strand at 3382.162 kb on + strand, within Dsui_3158 at 3382.282 kb on - strand, within Dsui_3158 at 3382.308 kb on - strand, within Dsui_3158 at 3382.358 kb on - strand, within Dsui_3158 at 3382.379 kb on - strand, within Dsui_3158 at 3382.505 kb on - strand, within Dsui_3158 at 3382.588 kb on + strand, within Dsui_3158 at 3382.663 kb on - strand, within Dsui_3158 at 3382.701 kb on - strand, within Dsui_3158 at 3382.776 kb on + strand, within Dsui_3158 at 3382.818 kb on - strand, within Dsui_3158
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 3,378,806 - Dsui_3156 0.34 -1.0 3,378,892 + Dsui_3156 0.45 -1.7 3,378,927 - Dsui_3156 0.50 -0.4 3,378,946 + Dsui_3156 0.52 +0.6 3,379,059 + Dsui_3156 0.67 -1.0 3,379,065 - Dsui_3156 0.68 -0.4 3,379,162 + Dsui_3156 0.80 +0.6 3,379,170 - +0.6 3,379,173 - Dsui_3156 0.82 -1.0 3,379,186 + Dsui_3156 0.83 -1.4 3,379,270 - +0.6 3,379,293 + -2.0 3,379,395 + -2.8 3,379,463 + -1.0 3,379,463 + +0.6 3,379,480 + -1.0 3,379,480 + -2.0 3,379,733 + -1.0 3,379,906 + Dsui_3157 0.17 +0.6 3,380,159 - Dsui_3157 0.28 +0.6 3,380,256 - Dsui_3157 0.32 +0.6 3,380,261 - +0.6 3,380,516 + Dsui_3157 0.43 -1.0 3,380,538 - Dsui_3157 0.44 -0.4 3,380,782 - +0.6 3,380,870 - +0.6 3,380,876 + Dsui_3157 0.58 -2.2 3,380,915 - Dsui_3157 0.60 +0.6 3,381,034 + Dsui_3157 0.65 -1.7 3,381,168 + Dsui_3157 0.71 -2.7 3,381,432 + Dsui_3157 0.82 +0.6 3,381,453 - +0.6 3,381,480 + Dsui_3157 0.84 +0.6 3,381,583 + Dsui_3157 0.89 -1.4 3,381,601 - Dsui_3157 0.89 +0.6 3,381,678 + -0.4 3,381,728 + -1.4 3,381,728 + -0.4 3,381,728 + +0.6 3,381,728 + -1.0 3,381,736 - -1.4 3,381,736 - -1.0 3,381,802 + -1.4 3,381,834 - +0.6 3,381,834 - -1.7 3,381,926 - -1.9 3,381,992 + -1.4 3,381,993 - -1.9 3,382,162 + Dsui_3158 0.17 -2.0 3,382,282 - Dsui_3158 0.26 -1.4 3,382,308 - Dsui_3158 0.28 +0.6 3,382,358 - Dsui_3158 0.32 -3.5 3,382,379 - Dsui_3158 0.33 -2.7 3,382,505 - Dsui_3158 0.43 -1.4 3,382,588 + Dsui_3158 0.49 +0.6 3,382,663 - Dsui_3158 0.54 -2.6 3,382,701 - Dsui_3158 0.57 -1.0 3,382,776 + Dsui_3158 0.63 +0.6 3,382,818 - Dsui_3158 0.66 -2.0
Or see this region's nucleotide sequence