Strain Fitness in Dechlorosoma suillum PS around Dsui_3136
Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.
Per-strain Table
Position | Strand | Gene | LocusTag | Fraction | ALP with Cisplatin 0.0007 mg/ml |
---|---|---|---|---|---|
remove | |||||
3,357,422 | - | Dsui_3135 | 0.40 | -0.4 | |
3,358,204 | - | -3.5 | |||
3,358,394 | + | Dsui_3136 | 0.13 | -1.0 | |
3,358,501 | + | -1.0 | |||
3,358,538 | - | Dsui_3136 | 0.26 | -0.2 | |
3,358,592 | - | Dsui_3136 | 0.30 | -0.8 | |
3,358,647 | + | Dsui_3136 | 0.35 | +0.6 | |
3,358,812 | - | Dsui_3136 | 0.49 | -0.6 | |
3,358,883 | - | Dsui_3136 | 0.55 | -0.4 | |
3,358,915 | - | Dsui_3136 | 0.57 | -0.3 | |
3,358,979 | + | Dsui_3136 | 0.63 | +0.6 | |
3,358,990 | + | Dsui_3136 | 0.64 | +0.6 | |
3,359,115 | - | Dsui_3136 | 0.74 | -0.3 | |
3,359,119 | - | Dsui_3136 | 0.74 | -0.4 | |
3,359,125 | - | Dsui_3136 | 0.75 | -0.5 | |
3,359,151 | + | Dsui_3136 | 0.77 | -2.8 | |
3,359,249 | - | Dsui_3136 | 0.85 | -0.1 | |
3,359,280 | - | Dsui_3136 | 0.88 | -0.7 | |
3,359,299 | + | Dsui_3136 | 0.90 | -0.4 | |
3,359,333 | + | -1.0 | |||
3,359,333 | + | -0.4 | |||
3,359,367 | - | -0.7 | |||
3,359,367 | - | -0.5 | |||
3,359,367 | - | -0.4 | |||
3,359,532 | - | -1.2 | |||
3,359,753 | - | -3.4 | |||
3,359,826 | - | -0.4 | |||
3,359,901 | - | -0.6 | |||
3,359,901 | - | -1.2 | |||
3,359,901 | - | -0.5 |
Or see this region's nucleotide sequence