Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_3070 and Dsui_3071 overlap by 70 nucleotides Dsui_3071 and Dsui_3072 are separated by 97 nucleotides Dsui_3072 and Dsui_3073 are separated by 3 nucleotides
Dsui_3070: Dsui_3070 - periplasmic component of amino acid ABC-type transporter/signal transduction system, at 3,285,402 to 3,286,253
_3070
Dsui_3071: Dsui_3071 - SprA-related family, at 3,286,184 to 3,286,972
_3071
Dsui_3072: Dsui_3072 - DNA repair protein RecN, at 3,287,070 to 3,288,725
_3072
Dsui_3073: Dsui_3073 - putative sugar kinase, at 3,288,729 to 3,289,607
_3073
Position (kb)
3287
3288
3289 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 3286.342 kb on + strand, within Dsui_3071 at 3286.351 kb on + strand, within Dsui_3071 at 3286.376 kb on - strand, within Dsui_3071 at 3286.497 kb on - strand, within Dsui_3071 at 3286.518 kb on + strand, within Dsui_3071 at 3286.592 kb on - strand, within Dsui_3071 at 3286.640 kb on - strand, within Dsui_3071 at 3286.640 kb on - strand, within Dsui_3071 at 3286.665 kb on + strand, within Dsui_3071 at 3286.684 kb on + strand at 3286.776 kb on - strand, within Dsui_3071 at 3286.988 kb on - strand at 3287.299 kb on + strand at 3287.446 kb on + strand at 3287.922 kb on - strand, within Dsui_3072 at 3287.950 kb on - strand, within Dsui_3072 at 3287.986 kb on + strand at 3287.999 kb on - strand, within Dsui_3072 at 3288.130 kb on + strand at 3288.406 kb on + strand, within Dsui_3072 at 3288.517 kb on - strand, within Dsui_3072 at 3288.544 kb on - strand, within Dsui_3072 at 3288.727 kb on + strand at 3288.735 kb on - strand at 3289.636 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 3,286,342 + Dsui_3071 0.20 +0.4 3,286,351 + Dsui_3071 0.21 -0.2 3,286,376 - Dsui_3071 0.24 -0.6 3,286,497 - Dsui_3071 0.40 +0.1 3,286,518 + Dsui_3071 0.42 -0.3 3,286,592 - Dsui_3071 0.52 +0.5 3,286,640 - Dsui_3071 0.58 +0.5 3,286,640 - Dsui_3071 0.58 -0.2 3,286,665 + Dsui_3071 0.61 -0.3 3,286,684 + -0.3 3,286,776 - Dsui_3071 0.75 +0.6 3,286,988 - -0.2 3,287,299 + -0.3 3,287,446 + +0.7 3,287,922 - Dsui_3072 0.51 -5.5 3,287,950 - Dsui_3072 0.53 -4.7 3,287,986 + +0.7 3,287,999 - Dsui_3072 0.56 -5.1 3,288,130 + -0.9 3,288,406 + Dsui_3072 0.81 -0.3 3,288,517 - Dsui_3072 0.87 -6.4 3,288,544 - Dsui_3072 0.89 -5.6 3,288,727 + +0.7 3,288,735 - -1.7 3,289,636 - -2.9
Or see this region's nucleotide sequence