Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2881 and Dsui_2882 are separated by 10 nucleotides Dsui_2882 and Dsui_2883 overlap by 1 nucleotides Dsui_2883 and Dsui_2884 are separated by 166 nucleotides
Dsui_2881: Dsui_2881 - 8-amino-7-oxononanoate synthase, at 3,077,077 to 3,078,252
_2881
Dsui_2882: Dsui_2882 - putative hydrolase or acyltransferase of alpha/beta superfamily, at 3,078,263 to 3,079,015
_2882
Dsui_2883: Dsui_2883 - biotin biosynthesis protein BioC, at 3,079,015 to 3,079,788
_2883
Dsui_2884: Dsui_2884 - dethiobiotin synthase, at 3,079,955 to 3,080,608
_2884
Position (kb)
3078
3079
3080 Strain fitness (log2 ratio)
-2
-1
0
1 at 3077.724 kb on - strand, within Dsui_2881 at 3077.838 kb on - strand, within Dsui_2881 at 3077.869 kb on - strand, within Dsui_2881 at 3077.915 kb on + strand, within Dsui_2881 at 3078.077 kb on + strand, within Dsui_2881 at 3078.085 kb on - strand at 3078.159 kb on - strand at 3078.199 kb on - strand at 3078.228 kb on - strand at 3078.285 kb on + strand at 3078.293 kb on - strand at 3078.298 kb on - strand at 3078.408 kb on + strand, within Dsui_2882 at 3078.505 kb on + strand, within Dsui_2882 at 3078.513 kb on - strand, within Dsui_2882 at 3078.524 kb on + strand, within Dsui_2882 at 3078.586 kb on - strand at 3078.878 kb on - strand, within Dsui_2882 at 3078.879 kb on - strand at 3078.983 kb on + strand at 3079.040 kb on + strand at 3079.069 kb on - strand at 3079.100 kb on - strand, within Dsui_2883 at 3079.224 kb on + strand at 3079.341 kb on + strand, within Dsui_2883 at 3079.354 kb on - strand at 3079.375 kb on - strand, within Dsui_2883 at 3079.439 kb on + strand, within Dsui_2883 at 3079.548 kb on - strand at 3079.601 kb on + strand, within Dsui_2883 at 3079.754 kb on - strand at 3079.770 kb on + strand at 3079.778 kb on - strand at 3079.928 kb on - strand at 3079.953 kb on + strand at 3079.961 kb on - strand at 3079.963 kb on + strand at 3080.005 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 3,077,724 - Dsui_2881 0.55 -1.2 3,077,838 - Dsui_2881 0.65 -0.2 3,077,869 - Dsui_2881 0.67 -0.8 3,077,915 + Dsui_2881 0.71 -0.3 3,078,077 + Dsui_2881 0.85 -0.8 3,078,085 - +0.8 3,078,159 - -1.2 3,078,199 - -0.8 3,078,228 - +0.8 3,078,285 + -0.3 3,078,293 - -0.2 3,078,298 - -0.2 3,078,408 + Dsui_2882 0.19 -1.3 3,078,505 + Dsui_2882 0.32 -0.8 3,078,513 - Dsui_2882 0.33 -0.2 3,078,524 + Dsui_2882 0.35 -0.8 3,078,586 - +0.8 3,078,878 - Dsui_2882 0.82 -1.5 3,078,879 - -0.2 3,078,983 + -0.9 3,079,040 + -1.7 3,079,069 - -1.5 3,079,100 - Dsui_2883 0.11 -2.2 3,079,224 + +0.8 3,079,341 + Dsui_2883 0.42 -0.8 3,079,354 - +0.8 3,079,375 - Dsui_2883 0.47 -0.8 3,079,439 + Dsui_2883 0.55 -0.8 3,079,548 - +0.8 3,079,601 + Dsui_2883 0.76 -1.0 3,079,754 - +0.8 3,079,770 + -0.8 3,079,778 - +0.8 3,079,928 - +0.8 3,079,953 + -0.5 3,079,961 - +0.8 3,079,963 + -0.2 3,080,005 - -0.2
Or see this region's nucleotide sequence