Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2786 and Dsui_2787 are separated by 346 nucleotides
Dsui_2786: Dsui_2786 - type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit, at 2,955,586 to 2,957,559
_2786
Dsui_2787: Dsui_2787 - membrane carboxypeptidase/penicillin-binding protein, at 2,957,906 to 2,960,278
_2787
Position (kb)
2957
2958
2959
2960
2961 Strain fitness (log2 ratio)
-2
-1
0
1 at 2957.615 kb on - strand at 2957.710 kb on - strand at 2957.854 kb on + strand at 2958.007 kb on - strand at 2958.095 kb on + strand at 2958.284 kb on + strand at 2958.375 kb on + strand at 2958.375 kb on + strand at 2958.393 kb on + strand, within Dsui_2787 at 2958.401 kb on - strand, within Dsui_2787 at 2958.431 kb on + strand, within Dsui_2787 at 2958.490 kb on + strand, within Dsui_2787 at 2958.561 kb on + strand, within Dsui_2787 at 2958.694 kb on - strand, within Dsui_2787 at 2958.734 kb on + strand at 2958.845 kb on + strand, within Dsui_2787 at 2958.845 kb on + strand, within Dsui_2787 at 2958.852 kb on - strand at 2959.004 kb on + strand at 2959.037 kb on - strand, within Dsui_2787 at 2959.128 kb on + strand, within Dsui_2787 at 2959.200 kb on + strand at 2959.218 kb on - strand, within Dsui_2787 at 2959.400 kb on - strand at 2959.400 kb on - strand at 2959.471 kb on + strand, within Dsui_2787 at 2959.479 kb on - strand, within Dsui_2787 at 2959.512 kb on + strand, within Dsui_2787 at 2959.520 kb on - strand, within Dsui_2787 at 2959.590 kb on + strand at 2959.590 kb on + strand, within Dsui_2787 at 2959.702 kb on + strand, within Dsui_2787 at 2959.821 kb on + strand, within Dsui_2787 at 2959.837 kb on + strand at 2959.886 kb on + strand at 2959.902 kb on + strand, within Dsui_2787 at 2959.914 kb on - strand, within Dsui_2787 at 2959.967 kb on - strand, within Dsui_2787 at 2960.059 kb on - strand at 2960.115 kb on - strand at 2960.390 kb on + strand at 2960.541 kb on + strand at 2960.583 kb on - strand at 2960.618 kb on - strand at 2960.657 kb on + strand at 2960.662 kb on - strand at 2960.674 kb on + strand at 2960.785 kb on - strand at 2960.785 kb on - strand at 2960.895 kb on - strand at 2960.895 kb on - strand at 2960.895 kb on - strand at 2960.919 kb on - strand at 2960.961 kb on - strand at 2960.961 kb on - strand at 2961.025 kb on - strand at 2961.140 kb on - strand at 2961.140 kb on - strand at 2961.237 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 2,957,615 - +0.1 2,957,710 - -0.8 2,957,854 + +0.8 2,958,007 - -0.2 2,958,095 + -0.2 2,958,284 + +0.8 2,958,375 + -0.2 2,958,375 + +0.8 2,958,393 + Dsui_2787 0.21 -0.8 2,958,401 - Dsui_2787 0.21 -0.8 2,958,431 + Dsui_2787 0.22 -0.8 2,958,490 + Dsui_2787 0.25 +0.8 2,958,561 + Dsui_2787 0.28 -0.2 2,958,694 - Dsui_2787 0.33 +0.8 2,958,734 + +0.8 2,958,845 + Dsui_2787 0.40 -1.5 2,958,845 + Dsui_2787 0.40 -0.2 2,958,852 - +0.8 2,959,004 + -0.2 2,959,037 - Dsui_2787 0.48 -0.2 2,959,128 + Dsui_2787 0.51 -0.2 2,959,200 + -0.8 2,959,218 - Dsui_2787 0.55 -0.8 2,959,400 - +0.8 2,959,400 - -0.2 2,959,471 + Dsui_2787 0.66 -2.4 2,959,479 - Dsui_2787 0.66 -0.8 2,959,512 + Dsui_2787 0.68 +0.8 2,959,520 - Dsui_2787 0.68 -1.2 2,959,590 + +0.8 2,959,590 + Dsui_2787 0.71 -1.2 2,959,702 + Dsui_2787 0.76 -0.8 2,959,821 + Dsui_2787 0.81 +0.8 2,959,837 + +0.8 2,959,886 + +0.8 2,959,902 + Dsui_2787 0.84 -1.8 2,959,914 - Dsui_2787 0.85 -0.2 2,959,967 - Dsui_2787 0.87 -0.8 2,960,059 - +0.8 2,960,115 - +0.8 2,960,390 + -0.8 2,960,541 + -1.2 2,960,583 - -0.2 2,960,618 - +0.8 2,960,657 + +0.8 2,960,662 - +0.8 2,960,674 + -1.2 2,960,785 - +0.8 2,960,785 - +0.8 2,960,895 - -1.2 2,960,895 - -0.8 2,960,895 - -0.2 2,960,919 - +0.8 2,960,961 - +0.8 2,960,961 - +1.4 2,961,025 - -1.5 2,961,140 - -0.2 2,961,140 - +0.8 2,961,237 - +0.8
Or see this region's nucleotide sequence