Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2481 and Dsui_2482 are separated by 71 nucleotides Dsui_2482 and Dsui_2483 overlap by 11 nucleotides Dsui_2483 and Dsui_2484 are separated by 28 nucleotides Dsui_2484 and Dsui_2485 are separated by 33 nucleotides
Dsui_2481: Dsui_2481 - DNA polymerase III, epsilon subunit, at 2,631,750 to 2,632,469
_2481
Dsui_2482: Dsui_2482 - ribonuclease HI, at 2,632,541 to 2,632,993
_2482
Dsui_2483: Dsui_2483 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,632,983 to 2,633,711
_2483
Dsui_2484: Dsui_2484 - hydroxyacylglutathione hydrolase, at 2,633,740 to 2,634,543
_2484
Dsui_2485: Dsui_2485 - response regulator containing CheY-like receiver domain and AraC-type DNA-binding domain, at 2,634,577 to 2,634,942
_2485
Position (kb)
2632
2633
2634 Strain fitness (log2 ratio)
-3
-2
-1
0
1 at 2632.499 kb on - strand at 2632.524 kb on - strand at 2632.524 kb on - strand at 2632.545 kb on - strand at 2632.975 kb on - strand at 2632.998 kb on - strand at 2633.732 kb on - strand at 2633.755 kb on - strand at 2633.758 kb on - strand at 2633.775 kb on - strand at 2633.829 kb on - strand, within Dsui_2484 at 2634.129 kb on + strand, within Dsui_2484 at 2634.142 kb on + strand, within Dsui_2484 at 2634.379 kb on - strand, within Dsui_2484 at 2634.404 kb on + strand, within Dsui_2484 at 2634.515 kb on + strand at 2634.537 kb on + strand at 2634.611 kb on + strand at 2634.656 kb on - strand, within Dsui_2485 at 2634.659 kb on + strand, within Dsui_2485 at 2634.708 kb on + strand, within Dsui_2485
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 2,632,499 - -0.3 2,632,524 - +0.2 2,632,524 - +1.0 2,632,545 - -0.2 2,632,975 - -1.5 2,632,998 - -0.1 2,633,732 - -0.1 2,633,755 - -0.3 2,633,758 - -0.7 2,633,775 - -0.6 2,633,829 - Dsui_2484 0.11 +0.4 2,634,129 + Dsui_2484 0.48 +0.6 2,634,142 + Dsui_2484 0.50 +0.6 2,634,379 - Dsui_2484 0.79 -1.4 2,634,404 + Dsui_2484 0.83 +0.6 2,634,515 + -2.8 2,634,537 + -1.7 2,634,611 + +0.6 2,634,656 - Dsui_2485 0.22 -0.6 2,634,659 + Dsui_2485 0.22 -1.0 2,634,708 + Dsui_2485 0.36 -3.0
Or see this region's nucleotide sequence