Strain Fitness in Dechlorosoma suillum PS around Dsui_2469

Experiment: ALP with Cisplatin 0.0007 mg/ml

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Only strains with sufficient reads to estimate fitness are shown, but the strain fitness values are still rather noisy and may be biased towards zero. Strains near the edge of a gene are not shown as being associated with that gene (they are in grey). Strains in the central 10-90% of a gene are color coded by the insertion's strand. Usually, "+" means that the selectable marker is encoded on the forward strand, i.e., transcribed rightward.

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500 ntDsui_2468 and Dsui_2469 are separated by 39 nucleotidesDsui_2469 and Dsui_2470 are separated by 7 nucleotides Dsui_2468: Dsui_2468 - conserved hypothetical protein, PP_1857 family, at 2,624,450 to 2,625,649 _2468 Dsui_2469: Dsui_2469 - uracil-DNA glycosylase, at 2,625,689 to 2,626,351 _2469 Dsui_2470: Dsui_2470 - excinuclease ABC, C subunit, at 2,626,359 to 2,628,209 _2470 Position (kb) 2625 2626 2627Strain fitness (log2 ratio) -5 -4 -3 -2 -1 0 1at 2625.701 kb on + strandat 2626.418 kb on + strandat 2626.537 kb on + strandat 2626.660 kb on + strand, within Dsui_2470at 2626.700 kb on + strand, within Dsui_2470at 2626.700 kb on + strand, within Dsui_2470at 2626.708 kb on + strand, within Dsui_2470at 2626.708 kb on - strandat 2626.711 kb on + strand, within Dsui_2470at 2626.711 kb on + strand, within Dsui_2470at 2626.711 kb on + strand, within Dsui_2470at 2626.711 kb on + strand, within Dsui_2470at 2626.711 kb on + strand, within Dsui_2470at 2626.711 kb on + strand, within Dsui_2470at 2626.843 kb on + strand, within Dsui_2470at 2626.997 kb on + strand, within Dsui_2470at 2627.093 kb on + strand, within Dsui_2470at 2627.194 kb on + strand, within Dsui_2470at 2627.225 kb on + strand, within Dsui_2470at 2627.306 kb on + strand, within Dsui_2470

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Per-strain Table

Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml
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2,625,701 + -3.5
2,626,418 + -3.2
2,626,537 + -1.7
2,626,660 + Dsui_2470 0.16 -3.0
2,626,700 + Dsui_2470 0.18 -1.4
2,626,700 + Dsui_2470 0.18 -3.2
2,626,708 + Dsui_2470 0.19 -2.4
2,626,708 - +0.6
2,626,711 + Dsui_2470 0.19 -2.8
2,626,711 + Dsui_2470 0.19 -2.0
2,626,711 + Dsui_2470 0.19 -5.5
2,626,711 + Dsui_2470 0.19 -3.2
2,626,711 + Dsui_2470 0.19 -3.2
2,626,711 + Dsui_2470 0.19 -0.4
2,626,843 + Dsui_2470 0.26 -3.3
2,626,997 + Dsui_2470 0.34 -1.7
2,627,093 + Dsui_2470 0.40 +0.6
2,627,194 + Dsui_2470 0.45 -2.2
2,627,225 + Dsui_2470 0.47 -3.8
2,627,306 + Dsui_2470 0.51 -2.4

Or see this region's nucleotide sequence