Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2459 and Dsui_2460 overlap by 8 nucleotides Dsui_2460 and Dsui_2461 overlap by 4 nucleotides Dsui_2461 and Dsui_2462 are separated by 30 nucleotides Dsui_2462 and Dsui_2463 are separated by 67 nucleotides
Dsui_2459: Dsui_2459 - hypothetical protein, at 2,617,667 to 2,618,038
_2459
Dsui_2460: Dsui_2460 - ribonuclease III, at 2,618,031 to 2,618,723
_2460
Dsui_2461: Dsui_2461 - GTP-binding protein Era, at 2,618,720 to 2,619,613
_2461
Dsui_2462: Dsui_2462 - DNA repair protein RecO, at 2,619,644 to 2,620,357
_2462
Dsui_2463: Dsui_2463 - pyridoxine 5''-phosphate synthase, at 2,620,425 to 2,621,177
_2463
Position (kb)
2618
2619
2620 Strain fitness (log2 ratio)
-7
-6
-5
-4
-3
-2
-1
0
1 at 2617.873 kb on + strand, within Dsui_2459 at 2617.887 kb on + strand, within Dsui_2459 at 2618.023 kb on + strand at 2618.023 kb on + strand at 2618.023 kb on + strand at 2618.031 kb on - strand at 2618.031 kb on - strand at 2618.031 kb on - strand at 2618.031 kb on - strand at 2619.597 kb on + strand at 2619.634 kb on + strand at 2619.659 kb on + strand at 2619.683 kb on + strand at 2619.747 kb on + strand, within Dsui_2462 at 2619.747 kb on + strand, within Dsui_2462 at 2619.760 kb on + strand, within Dsui_2462 at 2619.818 kb on + strand, within Dsui_2462 at 2619.829 kb on + strand, within Dsui_2462 at 2619.862 kb on + strand, within Dsui_2462 at 2619.949 kb on - strand, within Dsui_2462 at 2619.987 kb on - strand, within Dsui_2462 at 2619.995 kb on + strand, within Dsui_2462 at 2620.037 kb on + strand, within Dsui_2462 at 2620.091 kb on - strand, within Dsui_2462 at 2620.116 kb on - strand, within Dsui_2462 at 2620.145 kb on - strand at 2620.248 kb on + strand, within Dsui_2462 at 2620.323 kb on - strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 2,617,873 + Dsui_2459 0.55 -1.2 2,617,887 + Dsui_2459 0.59 -1.2 2,618,023 + -0.5 2,618,023 + -0.8 2,618,023 + -0.1 2,618,031 - +0.6 2,618,031 - +0.6 2,618,031 - +0.6 2,618,031 - +0.6 2,619,597 + -1.0 2,619,634 + +0.2 2,619,659 + -4.3 2,619,683 + -6.2 2,619,747 + Dsui_2462 0.14 -5.4 2,619,747 + Dsui_2462 0.14 -4.3 2,619,760 + Dsui_2462 0.16 -7.5 2,619,818 + Dsui_2462 0.24 -3.7 2,619,829 + Dsui_2462 0.26 -5.5 2,619,862 + Dsui_2462 0.31 -6.6 2,619,949 - Dsui_2462 0.43 -0.9 2,619,987 - Dsui_2462 0.48 +0.6 2,619,995 + Dsui_2462 0.49 -5.0 2,620,037 + Dsui_2462 0.55 -5.7 2,620,091 - Dsui_2462 0.63 -1.7 2,620,116 - Dsui_2462 0.66 +0.6 2,620,145 - +0.6 2,620,248 + Dsui_2462 0.85 -4.8 2,620,323 - +0.6
Or see this region's nucleotide sequence