Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2440 and Dsui_2441 are separated by 9 nucleotides Dsui_2441 and Dsui_2442 are separated by 12 nucleotides Dsui_2442 and Dsui_2443 are separated by 165 nucleotides Dsui_2443 and Dsui_2444 are separated by 20 nucleotides Dsui_2444 and Dsui_2445 are separated by 77 nucleotides
Dsui_2440: Dsui_2440 - ClpP class periplasmic serine protease, at 2,601,155 to 2,602,141
_2440
Dsui_2441: Dsui_2441 - putative methyltransferase, at 2,602,151 to 2,602,879
_2441
Dsui_2442: Dsui_2442 - MAF protein, at 2,602,892 to 2,603,485
_2442
Dsui_2443: Dsui_2443 - putative metal-binding protein, possibly nucleic-acid binding protein, at 2,603,651 to 2,604,142
_2443
Dsui_2444: Dsui_2444 - ribosomal protein L32, at 2,604,163 to 2,604,342
_2444
Dsui_2445: Dsui_2445 - fatty acid/phospholipid synthesis protein PlsX, at 2,604,420 to 2,605,460
_2445
Position (kb)
2602
2603
2604 Strain fitness (log2 ratio)
-2
-1
0
1
2
3 at 2601.928 kb on + strand, within Dsui_2440 at 2601.929 kb on + strand, within Dsui_2440 at 2601.936 kb on - strand, within Dsui_2440 at 2602.002 kb on - strand, within Dsui_2440 at 2602.109 kb on - strand at 2602.188 kb on - strand at 2602.230 kb on - strand, within Dsui_2441 at 2602.230 kb on - strand, within Dsui_2441 at 2602.252 kb on + strand, within Dsui_2441 at 2602.252 kb on + strand, within Dsui_2441 at 2602.260 kb on - strand, within Dsui_2441 at 2602.260 kb on - strand, within Dsui_2441 at 2602.260 kb on - strand, within Dsui_2441 at 2602.323 kb on - strand, within Dsui_2441 at 2602.349 kb on - strand, within Dsui_2441 at 2602.359 kb on - strand, within Dsui_2441 at 2602.389 kb on + strand, within Dsui_2441 at 2602.443 kb on + strand, within Dsui_2441 at 2602.462 kb on + strand, within Dsui_2441 at 2602.470 kb on - strand, within Dsui_2441 at 2602.524 kb on + strand, within Dsui_2441 at 2602.549 kb on + strand, within Dsui_2441 at 2602.570 kb on + strand, within Dsui_2441 at 2602.603 kb on + strand, within Dsui_2441 at 2602.611 kb on - strand, within Dsui_2441 at 2602.644 kb on - strand, within Dsui_2441 at 2602.650 kb on + strand, within Dsui_2441 at 2602.650 kb on + strand, within Dsui_2441 at 2602.650 kb on + strand, within Dsui_2441 at 2602.742 kb on - strand, within Dsui_2441 at 2602.749 kb on + strand, within Dsui_2441 at 2602.767 kb on + strand, within Dsui_2441 at 2602.775 kb on - strand, within Dsui_2441 at 2602.775 kb on - strand, within Dsui_2441 at 2602.775 kb on - strand, within Dsui_2441 at 2602.788 kb on + strand, within Dsui_2441 at 2602.796 kb on - strand, within Dsui_2441 at 2602.804 kb on + strand, within Dsui_2441 at 2602.870 kb on - strand at 2602.915 kb on - strand at 2602.929 kb on - strand at 2602.946 kb on - strand at 2602.946 kb on - strand at 2603.033 kb on + strand, within Dsui_2442 at 2603.033 kb on + strand, within Dsui_2442 at 2603.033 kb on + strand, within Dsui_2442 at 2603.033 kb on + strand, within Dsui_2442 at 2603.041 kb on - strand, within Dsui_2442 at 2603.109 kb on - strand, within Dsui_2442 at 2603.109 kb on - strand, within Dsui_2442 at 2603.112 kb on + strand, within Dsui_2442 at 2603.133 kb on + strand, within Dsui_2442 at 2603.197 kb on - strand, within Dsui_2442 at 2603.211 kb on + strand at 2603.212 kb on + strand, within Dsui_2442 at 2603.220 kb on - strand, within Dsui_2442 at 2603.245 kb on + strand, within Dsui_2442 at 2603.253 kb on - strand, within Dsui_2442 at 2603.258 kb on - strand, within Dsui_2442 at 2603.291 kb on + strand, within Dsui_2442 at 2603.309 kb on - strand, within Dsui_2442 at 2603.312 kb on + strand, within Dsui_2442 at 2603.315 kb on - strand, within Dsui_2442 at 2603.315 kb on - strand, within Dsui_2442 at 2603.315 kb on - strand, within Dsui_2442 at 2603.320 kb on - strand, within Dsui_2442 at 2603.329 kb on + strand, within Dsui_2442 at 2603.339 kb on + strand, within Dsui_2442 at 2603.352 kb on - strand, within Dsui_2442 at 2603.410 kb on - strand, within Dsui_2442 at 2603.410 kb on - strand, within Dsui_2442 at 2603.411 kb on - strand, within Dsui_2442 at 2603.417 kb on + strand at 2603.425 kb on - strand, within Dsui_2442 at 2603.459 kb on - strand at 2603.466 kb on + strand at 2603.466 kb on + strand at 2603.466 kb on + strand at 2603.466 kb on + strand at 2603.466 kb on + strand at 2603.466 kb on + strand at 2603.466 kb on + strand at 2603.474 kb on - strand at 2603.474 kb on - strand at 2603.474 kb on - strand at 2603.474 kb on - strand at 2603.474 kb on - strand at 2603.474 kb on - strand at 2603.512 kb on + strand at 2603.520 kb on - strand at 2603.520 kb on - strand at 2603.530 kb on - strand at 2603.534 kb on + strand at 2603.566 kb on + strand at 2603.566 kb on + strand at 2603.662 kb on + strand at 2603.675 kb on + strand at 2603.752 kb on + strand, within Dsui_2443 at 2603.771 kb on + strand, within Dsui_2443
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 2,601,928 + Dsui_2440 0.78 -1.6 2,601,929 + Dsui_2440 0.78 -1.7 2,601,936 - Dsui_2440 0.79 +0.7 2,602,002 - Dsui_2440 0.86 -0.9 2,602,109 - -2.1 2,602,188 - -1.7 2,602,230 - Dsui_2441 0.11 -1.3 2,602,230 - Dsui_2441 0.11 -0.9 2,602,252 + Dsui_2441 0.14 -0.2 2,602,252 + Dsui_2441 0.14 -0.4 2,602,260 - Dsui_2441 0.15 +0.7 2,602,260 - Dsui_2441 0.15 -2.7 2,602,260 - Dsui_2441 0.15 -0.9 2,602,323 - Dsui_2441 0.24 -0.9 2,602,349 - Dsui_2441 0.27 -1.3 2,602,359 - Dsui_2441 0.29 +3.0 2,602,389 + Dsui_2441 0.33 -0.6 2,602,443 + Dsui_2441 0.40 -0.6 2,602,462 + Dsui_2441 0.43 -1.1 2,602,470 - Dsui_2441 0.44 -1.9 2,602,524 + Dsui_2441 0.51 -0.8 2,602,549 + Dsui_2441 0.55 -1.3 2,602,570 + Dsui_2441 0.57 +0.7 2,602,603 + Dsui_2441 0.62 -1.2 2,602,611 - Dsui_2441 0.63 -1.9 2,602,644 - Dsui_2441 0.68 -1.9 2,602,650 + Dsui_2441 0.68 -0.3 2,602,650 + Dsui_2441 0.68 +0.7 2,602,650 + Dsui_2441 0.68 +0.7 2,602,742 - Dsui_2441 0.81 -1.7 2,602,749 + Dsui_2441 0.82 +0.7 2,602,767 + Dsui_2441 0.84 +0.7 2,602,775 - Dsui_2441 0.86 -1.7 2,602,775 - Dsui_2441 0.86 -0.3 2,602,775 - Dsui_2441 0.86 +0.7 2,602,788 + Dsui_2441 0.87 -1.3 2,602,796 - Dsui_2441 0.88 -1.3 2,602,804 + Dsui_2441 0.90 -0.3 2,602,870 - -0.9 2,602,915 - -0.3 2,602,929 - -1.7 2,602,946 - +0.7 2,602,946 - -0.9 2,603,033 + Dsui_2442 0.24 +0.7 2,603,033 + Dsui_2442 0.24 -0.3 2,603,033 + Dsui_2442 0.24 +0.7 2,603,033 + Dsui_2442 0.24 -0.3 2,603,041 - Dsui_2442 0.25 -2.1 2,603,109 - Dsui_2442 0.37 +0.7 2,603,109 - Dsui_2442 0.37 +0.7 2,603,112 + Dsui_2442 0.37 +0.7 2,603,133 + Dsui_2442 0.41 +0.7 2,603,197 - Dsui_2442 0.51 -0.3 2,603,211 + +0.7 2,603,212 + Dsui_2442 0.54 +0.7 2,603,220 - Dsui_2442 0.55 -2.1 2,603,245 + Dsui_2442 0.59 -0.9 2,603,253 - Dsui_2442 0.61 -0.9 2,603,258 - Dsui_2442 0.62 -0.3 2,603,291 + Dsui_2442 0.67 +0.7 2,603,309 - Dsui_2442 0.70 -2.1 2,603,312 + Dsui_2442 0.71 +0.7 2,603,315 - Dsui_2442 0.71 -2.1 2,603,315 - Dsui_2442 0.71 -0.9 2,603,315 - Dsui_2442 0.71 -0.3 2,603,320 - Dsui_2442 0.72 +0.7 2,603,329 + Dsui_2442 0.74 +0.7 2,603,339 + Dsui_2442 0.75 -1.3 2,603,352 - Dsui_2442 0.77 -0.9 2,603,410 - Dsui_2442 0.87 -0.9 2,603,410 - Dsui_2442 0.87 +0.7 2,603,411 - Dsui_2442 0.87 -0.3 2,603,417 + +0.7 2,603,425 - Dsui_2442 0.90 -0.3 2,603,459 - -0.9 2,603,466 + -1.7 2,603,466 + -0.3 2,603,466 + -0.3 2,603,466 + +0.7 2,603,466 + -0.3 2,603,466 + +0.7 2,603,466 + +0.7 2,603,474 - +0.7 2,603,474 - -0.3 2,603,474 - -0.9 2,603,474 - -1.3 2,603,474 - +0.7 2,603,474 - -1.9 2,603,512 + +0.7 2,603,520 - -0.9 2,603,520 - +1.7 2,603,530 - -2.2 2,603,534 + -0.9 2,603,566 + -1.3 2,603,566 + -1.7 2,603,662 + -0.2 2,603,675 + +0.4 2,603,752 + Dsui_2443 0.21 -2.2 2,603,771 + Dsui_2443 0.24 -1.6
Or see this region's nucleotide sequence