Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2384 and Dsui_2385 are separated by 49 nucleotides Dsui_2385 and Dsui_2386 are separated by 111 nucleotides
Dsui_2384: Dsui_2384 - putative esterase of the alpha-beta hydrolase superfamily, at 2,534,074 to 2,535,162
_2384
Dsui_2385: Dsui_2385 - transcription-repair coupling factor Mfd, at 2,535,212 to 2,538,808
_2385
Dsui_2386: Dsui_2386 - pyruvate-formate lyase-activating enzyme, at 2,538,920 to 2,540,020
_2386
Position (kb)
2535
2536
2537
2538
2539 Strain fitness (log2 ratio)
-6
-5
-4
-3
-2
-1
0
1 at 2534.226 kb on + strand, within Dsui_2384 at 2534.234 kb on - strand, within Dsui_2384 at 2534.234 kb on - strand, within Dsui_2384 at 2534.386 kb on - strand, within Dsui_2384 at 2534.464 kb on + strand, within Dsui_2384 at 2534.472 kb on - strand, within Dsui_2384 at 2534.575 kb on - strand, within Dsui_2384 at 2534.580 kb on - strand, within Dsui_2384 at 2534.597 kb on + strand, within Dsui_2384 at 2534.610 kb on + strand at 2534.768 kb on - strand, within Dsui_2384 at 2534.802 kb on - strand, within Dsui_2384 at 2534.885 kb on - strand, within Dsui_2384 at 2534.933 kb on + strand, within Dsui_2384 at 2534.970 kb on + strand at 2534.978 kb on - strand, within Dsui_2384 at 2535.017 kb on + strand, within Dsui_2384 at 2535.092 kb on - strand at 2535.145 kb on - strand at 2535.152 kb on + strand at 2535.155 kb on - strand at 2535.160 kb on - strand at 2535.200 kb on + strand at 2535.200 kb on + strand at 2535.208 kb on - strand at 2535.372 kb on + strand at 2535.479 kb on + strand at 2535.503 kb on + strand at 2535.530 kb on - strand at 2535.577 kb on - strand, within Dsui_2385 at 2535.586 kb on + strand at 2535.690 kb on - strand, within Dsui_2385 at 2535.811 kb on + strand at 2535.998 kb on + strand, within Dsui_2385 at 2536.122 kb on - strand, within Dsui_2385 at 2536.134 kb on - strand, within Dsui_2385 at 2536.210 kb on - strand, within Dsui_2385 at 2536.222 kb on + strand, within Dsui_2385 at 2536.479 kb on - strand, within Dsui_2385 at 2536.485 kb on + strand at 2536.906 kb on - strand, within Dsui_2385 at 2536.982 kb on - strand, within Dsui_2385 at 2537.010 kb on + strand at 2537.013 kb on - strand, within Dsui_2385 at 2537.106 kb on - strand, within Dsui_2385 at 2537.217 kb on - strand, within Dsui_2385 at 2537.363 kb on + strand at 2537.493 kb on - strand, within Dsui_2385 at 2537.627 kb on - strand, within Dsui_2385 at 2537.639 kb on - strand, within Dsui_2385 at 2538.098 kb on - strand, within Dsui_2385 at 2538.103 kb on - strand, within Dsui_2385 at 2538.121 kb on + strand at 2538.128 kb on - strand, within Dsui_2385 at 2538.370 kb on - strand, within Dsui_2385 at 2538.556 kb on - strand at 2538.648 kb on + strand at 2539.039 kb on + strand at 2539.047 kb on - strand, within Dsui_2386 at 2539.047 kb on - strand, within Dsui_2386 at 2539.047 kb on - strand at 2539.048 kb on + strand at 2539.098 kb on - strand, within Dsui_2386 at 2539.320 kb on - strand at 2539.331 kb on - strand at 2539.403 kb on - strand at 2539.451 kb on - strand at 2539.451 kb on - strand at 2539.625 kb on - strand, within Dsui_2386 at 2539.632 kb on - strand, within Dsui_2386 at 2539.632 kb on - strand, within Dsui_2386 at 2539.770 kb on - strand, within Dsui_2386 at 2539.786 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 2,534,226 + Dsui_2384 0.14 -0.2 2,534,234 - Dsui_2384 0.15 -1.2 2,534,234 - Dsui_2384 0.15 +0.8 2,534,386 - Dsui_2384 0.29 +0.8 2,534,464 + Dsui_2384 0.36 -0.2 2,534,472 - Dsui_2384 0.37 +0.8 2,534,575 - Dsui_2384 0.46 -2.6 2,534,580 - Dsui_2384 0.46 +0.8 2,534,597 + Dsui_2384 0.48 -0.8 2,534,610 + +0.8 2,534,768 - Dsui_2384 0.64 -0.2 2,534,802 - Dsui_2384 0.67 -0.8 2,534,885 - Dsui_2384 0.74 -1.2 2,534,933 + Dsui_2384 0.79 +0.8 2,534,970 + +0.8 2,534,978 - Dsui_2384 0.83 -0.2 2,535,017 + Dsui_2384 0.87 -0.2 2,535,092 - -0.2 2,535,145 - -0.8 2,535,152 + +0.8 2,535,155 - -0.3 2,535,160 - -0.4 2,535,200 + -0.2 2,535,200 + +0.8 2,535,208 - +0.1 2,535,372 + -1.2 2,535,479 + -0.2 2,535,503 + +0.8 2,535,530 - -5.2 2,535,577 - Dsui_2385 0.10 -4.3 2,535,586 + +0.8 2,535,690 - Dsui_2385 0.13 -5.1 2,535,811 + -0.2 2,535,998 + Dsui_2385 0.22 -0.8 2,536,122 - Dsui_2385 0.25 -5.4 2,536,134 - Dsui_2385 0.26 -2.5 2,536,210 - Dsui_2385 0.28 -4.9 2,536,222 + Dsui_2385 0.28 -0.8 2,536,479 - Dsui_2385 0.35 -2.2 2,536,485 + -0.2 2,536,906 - Dsui_2385 0.47 -3.5 2,536,982 - Dsui_2385 0.49 -5.3 2,537,010 + -0.2 2,537,013 - Dsui_2385 0.50 -3.9 2,537,106 - Dsui_2385 0.53 -4.5 2,537,217 - Dsui_2385 0.56 -4.5 2,537,363 + +0.8 2,537,493 - Dsui_2385 0.63 -3.8 2,537,627 - Dsui_2385 0.67 -5.9 2,537,639 - Dsui_2385 0.67 -4.8 2,538,098 - Dsui_2385 0.80 -2.7 2,538,103 - Dsui_2385 0.80 -3.9 2,538,121 + -0.8 2,538,128 - Dsui_2385 0.81 -4.2 2,538,370 - Dsui_2385 0.88 -5.5 2,538,556 - -4.0 2,538,648 + -0.8 2,539,039 + +0.8 2,539,047 - Dsui_2386 0.12 -0.2 2,539,047 - Dsui_2386 0.12 -1.5 2,539,047 - +0.8 2,539,048 + +0.8 2,539,098 - Dsui_2386 0.16 +0.8 2,539,320 - -0.2 2,539,331 - +0.8 2,539,403 - +0.8 2,539,451 - -0.8 2,539,451 - +0.8 2,539,625 - Dsui_2386 0.64 -0.8 2,539,632 - Dsui_2386 0.65 +0.8 2,539,632 - Dsui_2386 0.65 +0.8 2,539,770 - Dsui_2386 0.77 -0.8 2,539,786 + -0.2
Or see this region's nucleotide sequence