Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2203 and Dsui_2204 are separated by 132 nucleotides Dsui_2204 and Dsui_2205 are separated by 190 nucleotides
Dsui_2203: Dsui_2203 - enoyl-(acyl-carrier-protein) reductase (NADH), at 2,339,185 to 2,339,982
_2203
Dsui_2204: Dsui_2204 - ABC-type dipeptide transport system, periplasmic component, at 2,340,115 to 2,342,286
_2204
Dsui_2205: Dsui_2205 - aconitate hydratase 2, at 2,342,477 to 2,345,074
_2205
Position (kb)
2340
2341
2342
2343 Strain fitness (log2 ratio)
-2
-1
0
1
2 at 2339.169 kb on + strand at 2340.105 kb on + strand at 2340.207 kb on + strand at 2340.207 kb on + strand at 2340.207 kb on + strand at 2340.215 kb on - strand at 2340.264 kb on + strand at 2340.283 kb on + strand at 2340.283 kb on + strand at 2340.288 kb on + strand at 2340.288 kb on + strand at 2340.291 kb on - strand at 2340.296 kb on - strand at 2340.364 kb on + strand, within Dsui_2204 at 2340.446 kb on + strand, within Dsui_2204 at 2340.454 kb on - strand, within Dsui_2204 at 2340.579 kb on + strand, within Dsui_2204 at 2340.580 kb on - strand at 2340.605 kb on + strand, within Dsui_2204 at 2340.637 kb on - strand at 2340.717 kb on + strand, within Dsui_2204 at 2340.717 kb on + strand, within Dsui_2204 at 2340.725 kb on - strand, within Dsui_2204 at 2340.800 kb on + strand, within Dsui_2204 at 2340.852 kb on + strand, within Dsui_2204 at 2340.960 kb on + strand, within Dsui_2204 at 2340.998 kb on + strand, within Dsui_2204 at 2341.031 kb on + strand, within Dsui_2204 at 2341.039 kb on - strand, within Dsui_2204 at 2341.101 kb on + strand, within Dsui_2204 at 2341.320 kb on + strand, within Dsui_2204 at 2341.389 kb on + strand, within Dsui_2204 at 2341.549 kb on + strand, within Dsui_2204 at 2341.557 kb on - strand at 2341.578 kb on + strand, within Dsui_2204 at 2341.636 kb on + strand, within Dsui_2204 at 2341.641 kb on + strand, within Dsui_2204 at 2341.657 kb on - strand, within Dsui_2204 at 2341.703 kb on + strand, within Dsui_2204 at 2341.797 kb on + strand, within Dsui_2204 at 2341.818 kb on - strand at 2341.906 kb on + strand, within Dsui_2204 at 2341.906 kb on + strand, within Dsui_2204 at 2341.987 kb on - strand, within Dsui_2204 at 2342.077 kb on - strand at 2342.108 kb on - strand at 2342.123 kb on + strand at 2342.274 kb on - strand at 2342.301 kb on + strand at 2342.342 kb on + strand at 2342.368 kb on - strand at 2342.378 kb on + strand at 2342.378 kb on + strand at 2342.430 kb on + strand
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 2,339,169 + -0.1 2,340,105 + -0.6 2,340,207 + +0.9 2,340,207 + +0.9 2,340,207 + -2.1 2,340,215 - -0.6 2,340,264 + +0.9 2,340,283 + +2.5 2,340,283 + +1.9 2,340,288 + +0.8 2,340,288 + +0.5 2,340,291 - +0.9 2,340,296 - +0.9 2,340,364 + Dsui_2204 0.11 -0.6 2,340,446 + Dsui_2204 0.15 -1.4 2,340,454 - Dsui_2204 0.16 -0.1 2,340,579 + Dsui_2204 0.21 -1.1 2,340,580 - -0.1 2,340,605 + Dsui_2204 0.23 +0.9 2,340,637 - +0.9 2,340,717 + Dsui_2204 0.28 +0.9 2,340,717 + Dsui_2204 0.28 +0.2 2,340,725 - Dsui_2204 0.28 +0.9 2,340,800 + Dsui_2204 0.32 -0.6 2,340,852 + Dsui_2204 0.34 +2.2 2,340,960 + Dsui_2204 0.39 +0.3 2,340,998 + Dsui_2204 0.41 -2.1 2,341,031 + Dsui_2204 0.42 -0.1 2,341,039 - Dsui_2204 0.43 +0.9 2,341,101 + Dsui_2204 0.45 +0.5 2,341,320 + Dsui_2204 0.55 -0.6 2,341,389 + Dsui_2204 0.59 +0.1 2,341,549 + Dsui_2204 0.66 +1.5 2,341,557 - +0.9 2,341,578 + Dsui_2204 0.67 -0.6 2,341,636 + Dsui_2204 0.70 +0.1 2,341,641 + Dsui_2204 0.70 -1.9 2,341,657 - Dsui_2204 0.71 +0.9 2,341,703 + Dsui_2204 0.73 -0.1 2,341,797 + Dsui_2204 0.77 -1.4 2,341,818 - +0.9 2,341,906 + Dsui_2204 0.82 +0.4 2,341,906 + Dsui_2204 0.82 -0.9 2,341,987 - Dsui_2204 0.86 +0.9 2,342,077 - -0.1 2,342,108 - +0.9 2,342,123 + -1.6 2,342,274 - -1.4 2,342,301 + -1.5 2,342,342 + -0.3 2,342,368 - +0.9 2,342,378 + -2.4 2,342,378 + -0.8 2,342,430 + -0.6
Or see this region's nucleotide sequence