Experiment: ALP with Cisplatin 0.0007 mg/ml
Only strains with sufficient reads to estimate fitness are shown,
but the strain fitness values are still rather noisy and may be biased towards zero.
Strains near the edge of a gene are not shown as being associated with that
gene (they are in grey).
Strains in the central 10-90% of a gene are color coded by the insertion's strand.
Usually, "+" means that the selectable marker is encoded on the forward strand,
i.e., transcribed rightward.
500 nt Dsui_2094 and Dsui_2095 are separated by 72 nucleotides Dsui_2095 and Dsui_2096 are separated by 286 nucleotides
Dsui_2094: Dsui_2094 - putative autotransporter protein, at 2,215,649 to 2,219,413
_2094
Dsui_2095: Dsui_2095 - methylase involved in ubiquinone/menaquinone biosynthesis, at 2,219,486 to 2,220,172
_2095
Dsui_2096: Dsui_2096 - methyl-accepting chemotaxis protein, at 2,220,459 to 2,222,066
_2096
Position (kb)
2219
2220
2221 Strain fitness (log2 ratio)
-2
-1
0
1 at 2218.486 kb on + strand, within Dsui_2094 at 2218.868 kb on + strand, within Dsui_2094 at 2218.876 kb on - strand at 2219.023 kb on - strand at 2219.294 kb on + strand at 2219.491 kb on + strand at 2219.491 kb on + strand at 2219.533 kb on + strand at 2219.671 kb on - strand at 2219.778 kb on + strand, within Dsui_2095 at 2219.782 kb on + strand, within Dsui_2095 at 2219.946 kb on + strand at 2220.064 kb on - strand at 2220.161 kb on + strand at 2220.211 kb on + strand at 2220.316 kb on - strand at 2220.431 kb on - strand at 2220.451 kb on - strand at 2220.484 kb on + strand at 2220.676 kb on - strand, within Dsui_2096 at 2220.712 kb on + strand, within Dsui_2096 at 2220.734 kb on + strand, within Dsui_2096 at 2220.741 kb on + strand at 2220.772 kb on + strand, within Dsui_2096 at 2220.869 kb on + strand, within Dsui_2096 at 2220.931 kb on - strand, within Dsui_2096 at 2220.987 kb on + strand, within Dsui_2096 at 2221.080 kb on + strand, within Dsui_2096 at 2221.133 kb on + strand, within Dsui_2096 at 2221.165 kb on + strand, within Dsui_2096
Per-strain Table
Position Strand Gene LocusTag Fraction ALP with Cisplatin 0.0007 mg/ml remove 2,218,486 + Dsui_2094 0.75 +0.4 2,218,868 + Dsui_2094 0.85 -1.4 2,218,876 - -0.0 2,219,023 - +1.0 2,219,294 + +1.0 2,219,491 + +1.0 2,219,491 + +1.0 2,219,533 + -0.4 2,219,671 - -0.6 2,219,778 + Dsui_2095 0.43 -1.8 2,219,782 + Dsui_2095 0.43 -1.0 2,219,946 + +1.0 2,220,064 - +1.0 2,220,161 + +1.0 2,220,211 + -2.5 2,220,316 - +1.0 2,220,431 - -0.0 2,220,451 - +1.0 2,220,484 + -0.0 2,220,676 - Dsui_2096 0.13 -0.0 2,220,712 + Dsui_2096 0.16 +1.0 2,220,734 + Dsui_2096 0.17 -0.6 2,220,741 + -0.0 2,220,772 + Dsui_2096 0.19 -2.4 2,220,869 + Dsui_2096 0.25 +1.0 2,220,931 - Dsui_2096 0.29 -0.0 2,220,987 + Dsui_2096 0.33 -1.0 2,221,080 + Dsui_2096 0.39 -1.0 2,221,133 + Dsui_2096 0.42 -1.0 2,221,165 + Dsui_2096 0.44 -0.0
Or see this region's nucleotide sequence